BLASTX nr result

ID: Atractylodes21_contig00043175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043175
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi...    91   7e-17
emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]    89   4e-16
ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp....    71   1e-10
ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10

>ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|222846179|gb|EEE83726.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/58 (77%), Positives = 51/58 (87%)
 Frame = +3

Query: 141 LDHKDWLSPTEVVRIFETLKDPNSILTVLNQLSKRKDYKPNEALYTSVINNLSKAKNF 314
           L HKDWLSP EV++IFE LKDPNSI++V NQ SKRKDYKPNEALYT VIN L++AKNF
Sbjct: 2   LTHKDWLSPNEVIKIFENLKDPNSIISVWNQYSKRKDYKPNEALYTQVINKLAQAKNF 59


>ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 45/86 (52%), Positives = 60/86 (69%)
 Frame = +3

Query: 57  IYPIFIQPSWYHSAASLDSFRKPDPFNLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQL 236
           I+P  IQ S + S         PD    LDHKDWLSP EV++IF+ L++P S++ VL+ +
Sbjct: 22  IHPTLIQKSTFFSTFP------PDDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSV 75

Query: 237 SKRKDYKPNEALYTSVINNLSKAKNF 314
           SKRKD+KPNEALYT VIN L++A+ F
Sbjct: 76  SKRKDFKPNEALYTLVINKLAQARMF 101


>emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera]
          Length = 393

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/86 (51%), Positives = 59/86 (68%)
 Frame = +3

Query: 57  IYPIFIQPSWYHSAASLDSFRKPDPFNLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQL 236
           I+P  IQ S + S         PD    LDHKDWLSP EV++IF+ L++P S++ VL+ +
Sbjct: 22  IHPTLIQKSIFFSTFP------PDDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSV 75

Query: 237 SKRKDYKPNEALYTSVINNLSKAKNF 314
            KRKD+KPNEALYT VIN L++A+ F
Sbjct: 76  CKRKDFKPNEALYTLVINKLAQARMF 101


>ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328724|gb|EFH59143.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 409

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 31/63 (49%), Positives = 42/63 (66%)
 Frame = +3

Query: 126 DPFNLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQLSKRKDYKPNEALYTSVINNLSKA 305
           D    L HKDWL+P EV++IFE +KDP+ ++      SKRKDY+P E+LY  +IN   +A
Sbjct: 49  DKLARLKHKDWLAPNEVLKIFENVKDPSFLMPAYQHYSKRKDYQPTESLYALLINKFGQA 108

Query: 306 KNF 314
           K F
Sbjct: 109 KMF 111


>ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
           gi|449503658|ref|XP_004162112.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g14580,
           mitochondrial-like [Cucumis sativus]
          Length = 411

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 5/80 (6%)
 Frame = +3

Query: 90  HSAASLDSF----RKPDPF-NLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQLSKRKDY 254
           H  +S  SF    ++P  F + L H+DWLSP EV+ I + ++ P+S+L  L+Q S RKDY
Sbjct: 28  HLPSSSSSFSTSPKQPSVFPHKLSHRDWLSPNEVINIIQQIQHPSSVLAFLHQWSNRKDY 87

Query: 255 KPNEALYTSVINNLSKAKNF 314
           KPN+ +YT V++ L++ + F
Sbjct: 88  KPNKEIYTLVVSRLAEGRLF 107


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