BLASTX nr result
ID: Atractylodes21_contig00043175
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00043175 (315 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|2... 99 5e-19 ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containi... 91 7e-17 emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera] 89 4e-16 ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp.... 71 1e-10 ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containi... 70 1e-10 >ref|XP_002298921.1| predicted protein [Populus trichocarpa] gi|222846179|gb|EEE83726.1| predicted protein [Populus trichocarpa] Length = 326 Score = 98.6 bits (244), Expect = 5e-19 Identities = 45/58 (77%), Positives = 51/58 (87%) Frame = +3 Query: 141 LDHKDWLSPTEVVRIFETLKDPNSILTVLNQLSKRKDYKPNEALYTSVINNLSKAKNF 314 L HKDWLSP EV++IFE LKDPNSI++V NQ SKRKDYKPNEALYT VIN L++AKNF Sbjct: 2 LTHKDWLSPNEVIKIFENLKDPNSIISVWNQYSKRKDYKPNEALYTQVINKLAQAKNF 59 >ref|XP_002267684.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial-like [Vitis vinifera] Length = 393 Score = 91.3 bits (225), Expect = 7e-17 Identities = 45/86 (52%), Positives = 60/86 (69%) Frame = +3 Query: 57 IYPIFIQPSWYHSAASLDSFRKPDPFNLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQL 236 I+P IQ S + S PD LDHKDWLSP EV++IF+ L++P S++ VL+ + Sbjct: 22 IHPTLIQKSTFFSTFP------PDDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSV 75 Query: 237 SKRKDYKPNEALYTSVINNLSKAKNF 314 SKRKD+KPNEALYT VIN L++A+ F Sbjct: 76 SKRKDFKPNEALYTLVINKLAQARMF 101 >emb|CAN60667.1| hypothetical protein VITISV_028261 [Vitis vinifera] Length = 393 Score = 89.0 bits (219), Expect = 4e-16 Identities = 44/86 (51%), Positives = 59/86 (68%) Frame = +3 Query: 57 IYPIFIQPSWYHSAASLDSFRKPDPFNLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQL 236 I+P IQ S + S PD LDHKDWLSP EV++IF+ L++P S++ VL+ + Sbjct: 22 IHPTLIQKSIFFSTFP------PDDLKRLDHKDWLSPREVLKIFDGLRNPESVMPVLDSV 75 Query: 237 SKRKDYKPNEALYTSVINNLSKAKNF 314 KRKD+KPNEALYT VIN L++A+ F Sbjct: 76 CKRKDFKPNEALYTLVINKLAQARMF 101 >ref|XP_002882884.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297328724|gb|EFH59143.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 409 Score = 70.9 bits (172), Expect = 1e-10 Identities = 31/63 (49%), Positives = 42/63 (66%) Frame = +3 Query: 126 DPFNLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQLSKRKDYKPNEALYTSVINNLSKA 305 D L HKDWL+P EV++IFE +KDP+ ++ SKRKDY+P E+LY +IN +A Sbjct: 49 DKLARLKHKDWLAPNEVLKIFENVKDPSFLMPAYQHYSKRKDYQPTESLYALLINKFGQA 108 Query: 306 KNF 314 K F Sbjct: 109 KMF 111 >ref|XP_004146072.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial-like [Cucumis sativus] gi|449503658|ref|XP_004162112.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14580, mitochondrial-like [Cucumis sativus] Length = 411 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 5/80 (6%) Frame = +3 Query: 90 HSAASLDSF----RKPDPF-NLLDHKDWLSPTEVVRIFETLKDPNSILTVLNQLSKRKDY 254 H +S SF ++P F + L H+DWLSP EV+ I + ++ P+S+L L+Q S RKDY Sbjct: 28 HLPSSSSSFSTSPKQPSVFPHKLSHRDWLSPNEVINIIQQIQHPSSVLAFLHQWSNRKDY 87 Query: 255 KPNEALYTSVINNLSKAKNF 314 KPN+ +YT V++ L++ + F Sbjct: 88 KPNKEIYTLVVSRLAEGRLF 107