BLASTX nr result

ID: Atractylodes21_contig00043102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043102
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEQ55279.1| expansin [Breonia chinensis] gi|351630279|gb|AEQ5...   197   1e-48
gb|AFK48363.1| unknown [Medicago truncatula]                          196   3e-48
gb|AEQ55273.1| expansin [Breonia chinensis] gi|351630267|gb|AEQ5...   195   5e-48
gb|ADD14637.1| expansin precursor, partial [Solanum tuberosum]        191   6e-47
ref|NP_001234364.1| expansin precursor [Solanum lycopersicum] gi...   191   6e-47

>gb|AEQ55279.1| expansin [Breonia chinensis] gi|351630279|gb|AEQ55294.1| expansin
           [Breonia chinensis]
          Length = 248

 Score =  197 bits (500), Expect = 1e-48
 Identities = 87/104 (83%), Positives = 99/104 (95%)
 Frame = +3

Query: 6   YRRVPCKKKGGIRFTVNGHSYFNLVLITNVGGAGDVTAVAIKGSKTGWVPMSRNWGQNWQ 185
           YRRVPC+K+GGIRFT+NGHSYFNLVLITNVGGAGDV AV++KGS++ W P+SRNWGQNWQ
Sbjct: 145 YRRVPCQKRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSVKGSRSNWQPLSRNWGQNWQ 204

Query: 186 SNSNLDGQALSFKVTTSDGRTVICNNAVSAGWSFGQTYTGGQFT 317
           SNS LDGQ+LSFKVTTSDGRTV+CNNA+ AGWSFGQT+TGGQFT
Sbjct: 205 SNSFLDGQSLSFKVTTSDGRTVVCNNAIPAGWSFGQTFTGGQFT 248


>gb|AFK48363.1| unknown [Medicago truncatula]
          Length = 247

 Score =  196 bits (497), Expect = 3e-48
 Identities = 90/103 (87%), Positives = 97/103 (94%)
 Frame = +3

Query: 6   YRRVPCKKKGGIRFTVNGHSYFNLVLITNVGGAGDVTAVAIKGSKTGWVPMSRNWGQNWQ 185
           Y+RVPC+KKGGIRFT+NGHSYFNLVLITNVGGAGDVTAV+IKGSKT W PMSRNWGQNWQ
Sbjct: 145 YKRVPCQKKGGIRFTINGHSYFNLVLITNVGGAGDVTAVSIKGSKTNWQPMSRNWGQNWQ 204

Query: 186 SNSNLDGQALSFKVTTSDGRTVICNNAVSAGWSFGQTYTGGQF 314
           SNSNLDGQ+LSFKVT+SDGRTVI NN V AGWSFGQT+TG QF
Sbjct: 205 SNSNLDGQSLSFKVTSSDGRTVIANNVVPAGWSFGQTFTGLQF 247


>gb|AEQ55273.1| expansin [Breonia chinensis] gi|351630267|gb|AEQ55288.1| expansin
           [Breonia chinensis]
          Length = 248

 Score =  195 bits (495), Expect = 5e-48
 Identities = 88/103 (85%), Positives = 97/103 (94%)
 Frame = +3

Query: 6   YRRVPCKKKGGIRFTVNGHSYFNLVLITNVGGAGDVTAVAIKGSKTGWVPMSRNWGQNWQ 185
           YRRVPC+KKGGIRFT+NGHSYFNLVLITNVGGAGDV AV+IKGS++ W PMSRNWGQNWQ
Sbjct: 145 YRRVPCQKKGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRSDWQPMSRNWGQNWQ 204

Query: 186 SNSNLDGQALSFKVTTSDGRTVICNNAVSAGWSFGQTYTGGQF 314
           SNS LDGQ+LSFKVTTSDGRTV+CNNA+ AGWSFGQT+TG QF
Sbjct: 205 SNSFLDGQSLSFKVTTSDGRTVVCNNAIPAGWSFGQTFTGAQF 247


>gb|ADD14637.1| expansin precursor, partial [Solanum tuberosum]
          Length = 207

 Score =  191 bits (486), Expect = 6e-47
 Identities = 85/104 (81%), Positives = 96/104 (92%)
 Frame = +3

Query: 6   YRRVPCKKKGGIRFTVNGHSYFNLVLITNVGGAGDVTAVAIKGSKTGWVPMSRNWGQNWQ 185
           YRRVPC+KKGGIRFT+NGHSYFNLVL+TNVGG+GDV AV+IKGS+T W+ MSRNWGQNWQ
Sbjct: 104 YRRVPCQKKGGIRFTMNGHSYFNLVLVTNVGGSGDVNAVSIKGSRTEWIAMSRNWGQNWQ 163

Query: 186 SNSNLDGQALSFKVTTSDGRTVICNNAVSAGWSFGQTYTGGQFT 317
           SN+ LDGQ LSFKVTT DGRTV+CNNA+ AGWSFG+TYTG QFT
Sbjct: 164 SNALLDGQILSFKVTTGDGRTVLCNNAIPAGWSFGKTYTGAQFT 207


>ref|NP_001234364.1| expansin precursor [Solanum lycopersicum]
           gi|11192001|gb|AAG32921.1|AF184233_1 expansin [Solanum
           lycopersicum]
          Length = 250

 Score =  191 bits (486), Expect = 6e-47
 Identities = 84/104 (80%), Positives = 96/104 (92%)
 Frame = +3

Query: 6   YRRVPCKKKGGIRFTVNGHSYFNLVLITNVGGAGDVTAVAIKGSKTGWVPMSRNWGQNWQ 185
           YRRVPC++KGG+RFT+NGHSYFNLVL+TNVGG+GDV AV+IKGS+TGW+ MSRNWGQNWQ
Sbjct: 147 YRRVPCQRKGGMRFTMNGHSYFNLVLVTNVGGSGDVNAVSIKGSRTGWIAMSRNWGQNWQ 206

Query: 186 SNSNLDGQALSFKVTTSDGRTVICNNAVSAGWSFGQTYTGGQFT 317
           SN+ LDGQ LSFKVTT DGRTV CNNA+ AGWSFG+TYTG QFT
Sbjct: 207 SNALLDGQILSFKVTTGDGRTVFCNNAIPAGWSFGKTYTGAQFT 250


Top