BLASTX nr result

ID: Atractylodes21_contig00043060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043060
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC34447.1| ZF-HD homeobox protein [Flaveria bidentis]            153   2e-35
ref|XP_003635057.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   138   5e-31
ref|XP_002285709.1| PREDICTED: ZF-HD homeobox protein At4g24660 ...   136   2e-30
emb|CAN75153.1| hypothetical protein VITISV_035994 [Vitis vinifera]   136   2e-30
gb|ABY61023.1| zinc finger homeodomain protein 1 [Saruma henryi]      134   8e-30

>emb|CAC34447.1| ZF-HD homeobox protein [Flaveria bidentis]
          Length = 237

 Score =  153 bits (386), Expect = 2e-35
 Identities = 84/143 (58%), Positives = 93/143 (65%), Gaps = 17/143 (11%)
 Frame = -3

Query: 380 NCHRNFHRKEPV--------QLPATFQHHQITP-PSYYYNHRPSGYLHVM----SHHHRP 240
           NCHRNFHRKE          Q  A  QH  IT  P Y+++HRP+GYLH+     S H R 
Sbjct: 84  NCHRNFHRKEVEGQQRQHQHQQQAALQHQYITATPYYHHHHRPTGYLHMKPPPSSLHQRQ 143

Query: 239 LALPSTSREDLEEISNPXXXXXXXXS----KKRFRTKFTQYQKDRMLPFAEGLGWHIQKE 72
           LALPSTSR+DL+EISNP             KKRFRTKFTQ QKDRML F+E LGW IQK 
Sbjct: 144 LALPSTSRDDLDEISNPSSSGGGGVGGSGSKKRFRTKFTQDQKDRMLAFSEALGWRIQKH 203

Query: 71  DEVGVQQFCAEIGIKRKVLKVWM 3
           DE  VQQFC E G+KR VLKVWM
Sbjct: 204 DEAAVQQFCNETGVKRHVLKVWM 226


>ref|XP_003635057.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 244

 Score =  138 bits (347), Expect = 5e-31
 Identities = 77/135 (57%), Positives = 85/135 (62%), Gaps = 9/135 (6%)
 Frame = -3

Query: 380 NCHRNFHRKEPVQLPATFQHHQIT--PPSYYYNHRPSGYLHVMSHHHRPLALPSTS---- 219
           NCHRNFHRKE       F HH     P    Y   P+GYLHV +HH RPLALPSTS    
Sbjct: 86  NCHRNFHRKEMEGGGEGFHHHHHPHQPQFSPYYRTPAGYLHVAAHH-RPLALPSTSGGGG 144

Query: 218 ---REDLEEISNPXXXXXXXXSKKRFRTKFTQYQKDRMLPFAEGLGWHIQKEDEVGVQQF 48
              R+D E++SNP         KKRFRTKFTQ QKD+M   AE LGW IQK DE  VQQF
Sbjct: 145 THSRDDQEDVSNPSGAGSS---KKRFRTKFTQEQKDKMFGLAERLGWRIQKHDEAVVQQF 201

Query: 47  CAEIGIKRKVLKVWM 3
           C+E G+KR VLKVWM
Sbjct: 202 CSETGVKRHVLKVWM 216


>ref|XP_002285709.1| PREDICTED: ZF-HD homeobox protein At4g24660 [Vitis vinifera]
          Length = 230

 Score =  136 bits (343), Expect = 2e-30
 Identities = 76/136 (55%), Positives = 84/136 (61%), Gaps = 10/136 (7%)
 Frame = -3

Query: 380 NCHRNFHRKEPVQLPATFQHHQITPPSYYYNHRPSGYLHVMSHHHRPLALPSTS------ 219
           NCHRNFHRKE         +HQ +P    Y   P+GYLHV    +RPLALPSTS      
Sbjct: 91  NCHRNFHRKES---EGDTLYHQFSP----YYRTPAGYLHVAPSQYRPLALPSTSGGGGHS 143

Query: 218 REDLEEISNPXXXXXXXXS----KKRFRTKFTQYQKDRMLPFAEGLGWHIQKEDEVGVQQ 51
           RED E++SNP             KKRFRTKFTQ QKD+ML FAE LGW IQK DE  VQQ
Sbjct: 144 REDQEDVSNPSSSGGGGGGSGSLKKRFRTKFTQEQKDKMLAFAETLGWRIQKHDEAAVQQ 203

Query: 50  FCAEIGIKRKVLKVWM 3
           FC E  +KR VLKVWM
Sbjct: 204 FCQETCVKRHVLKVWM 219


>emb|CAN75153.1| hypothetical protein VITISV_035994 [Vitis vinifera]
          Length = 284

 Score =  136 bits (343), Expect = 2e-30
 Identities = 76/136 (55%), Positives = 84/136 (61%), Gaps = 10/136 (7%)
 Frame = -3

Query: 380 NCHRNFHRKEPVQLPATFQHHQITPPSYYYNHRPSGYLHVMSHHHRPLALPSTS------ 219
           NCHRNFHRKE         +HQ +P    Y   P+GYLHV    +RPLALPSTS      
Sbjct: 145 NCHRNFHRKES---EGDTLYHQFSP----YYRTPAGYLHVAPSQYRPLALPSTSGGGGHS 197

Query: 218 REDLEEISNPXXXXXXXXS----KKRFRTKFTQYQKDRMLPFAEGLGWHIQKEDEVGVQQ 51
           RED E++SNP             KKRFRTKFTQ QKD+ML FAE LGW IQK DE  VQQ
Sbjct: 198 REDQEDVSNPSSSGGGGGGSGSLKKRFRTKFTQEQKDKMLAFAETLGWRIQKHDEAAVQQ 257

Query: 50  FCAEIGIKRKVLKVWM 3
           FC E  +KR VLKVWM
Sbjct: 258 FCQETCVKRHVLKVWM 273


>gb|ABY61023.1| zinc finger homeodomain protein 1 [Saruma henryi]
          Length = 242

 Score =  134 bits (337), Expect = 8e-30
 Identities = 78/141 (55%), Positives = 86/141 (60%), Gaps = 15/141 (10%)
 Frame = -3

Query: 380 NCHRNFHRKEPVQLPATFQHH--QITPPSYYYNHRPSGYLHVMSHHHRP-LALPSTS--- 219
           NCHRNFHRKE     + F HH  Q  P S YY   P+GYLHV  HH  P L LP TS   
Sbjct: 92  NCHRNFHRKESDGEGSVFHHHHQQQQPFSPYYR-TPAGYLHVAPHHRPPALVLPLTSGGG 150

Query: 218 ---REDLEEISNPXXXXXXXXS------KKRFRTKFTQYQKDRMLPFAEGLGWHIQKEDE 66
              R+D E+ISNP               KKRFRTKFTQ QKD+ML FAE +GW IQK+DE
Sbjct: 151 AHSRDDQEDISNPSSGGGIGVGGGSGSGKKRFRTKFTQEQKDKMLGFAERVGWRIQKQDE 210

Query: 65  VGVQQFCAEIGIKRKVLKVWM 3
             VQQFC E  +KR VLKVWM
Sbjct: 211 AVVQQFCMETNVKRHVLKVWM 231


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