BLASTX nr result

ID: Atractylodes21_contig00043027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00043027
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_005415572.1| hypothetical protein RSPPHO_03263, partial [...   101   5e-20
ref|YP_005415584.1| hypothetical protein RSPPHO_03275, partial [...   100   1e-19
ref|YP_005415587.1| hypothetical protein RSPPHO_03278, partial [...   100   2e-19
ref|ZP_07287469.1| LOW QUALITY PROTEIN: conserved hypothetical p...    78   6e-13
ref|ZP_02079996.1| hypothetical protein CLOLEP_01448 [Clostridiu...    77   1e-12

>ref|YP_005415572.1| hypothetical protein RSPPHO_03263, partial [Rhodospirillum
           photometricum DSM 122] gi|378401486|emb|CCG06602.1|
           Putative uncharacterized protein, partial
           [Rhodospirillum photometricum DSM 122]
          Length = 114

 Score =  101 bits (252), Expect = 5e-20
 Identities = 56/100 (56%), Positives = 62/100 (62%)
 Frame = +3

Query: 60  PSGTGQASHPIRHLAISQSPVFLLNSCHPLVCAPTTRLREQWASLSRSYGGKLPSSFNIV 239
           PSGTGQAS PIR LA SQSPVFL+NS HPLVCAP+  L +  A  SRSYGG LPSSFN +
Sbjct: 1   PSGTGQASDPIRRLATSQSPVFLVNSRHPLVCAPSPWLPKTRAPFSRSYGGILPSSFNTI 60

Query: 240 LSSALXXXXXXXXXXXXXXXXXXXFLEPLRSPTNPLRSDN 359
           LSSAL                   FL  +  P NP+R DN
Sbjct: 61  LSSALVYSTSPPVSVWGTVHTWGYFLAFVSCPVNPIRPDN 100


>ref|YP_005415584.1| hypothetical protein RSPPHO_03275, partial [Rhodospirillum
           photometricum DSM 122] gi|378401498|emb|CCG06614.1|
           Putative uncharacterized protein, partial
           [Rhodospirillum photometricum DSM 122]
          Length = 114

 Score =  100 bits (249), Expect = 1e-19
 Identities = 57/100 (57%), Positives = 62/100 (62%)
 Frame = +3

Query: 60  PSGTGQASHPIRHLAISQSPVFLLNSCHPLVCAPTTRLREQWASLSRSYGGKLPSSFNIV 239
           PSGTGQAS PIR LA SQSPVFL+NS HPLVCAP+  L +  A  SRSYGG LPSSFN +
Sbjct: 1   PSGTGQASDPIRRLATSQSPVFLVNSRHPLVCAPSPWLPKTRAPFSRSYGGILPSSFNTI 60

Query: 240 LSSALXXXXXXXXXXXXXXXXXXXFLEPLRSPTNPLRSDN 359
           LSSAL                   FL  L    NP+RSDN
Sbjct: 61  LSSALVYSTSPPVSVWGTVHTWGYFLAFLGGLINPIRSDN 100


>ref|YP_005415587.1| hypothetical protein RSPPHO_03278, partial [Rhodospirillum
           photometricum DSM 122] gi|378401501|emb|CCG06617.1|
           Putative uncharacterized protein, partial
           [Rhodospirillum photometricum DSM 122]
          Length = 114

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/100 (55%), Positives = 61/100 (61%)
 Frame = +3

Query: 60  PSGTGQASHPIRHLAISQSPVFLLNSCHPLVCAPTTRLREQWASLSRSYGGKLPSSFNIV 239
           PSGTGQAS PIR LA SQ PVFL+NS HPLVCAP+  L +  A  SRSYGG LPSSFN +
Sbjct: 1   PSGTGQASDPIRRLATSQGPVFLVNSRHPLVCAPSPWLPKTRAPFSRSYGGILPSSFNTI 60

Query: 240 LSSALXXXXXXXXXXXXXXXXXXXFLEPLRSPTNPLRSDN 359
           LSSAL                   FL  +  P NP+R DN
Sbjct: 61  LSSALVYSTSPPVSVWGTVHTWGYFLAFVSCPVNPIRPDN 100


>ref|ZP_07287469.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Streptomyces
           sp. C] gi|302535773|ref|ZP_07288115.1| LOW QUALITY
           PROTEIN: conserved hypothetical protein [Streptomyces
           sp. C] gi|302444022|gb|EFL15838.1| LOW QUALITY PROTEIN:
           conserved hypothetical protein [Streptomyces sp. C]
           gi|302444668|gb|EFL16484.1| LOW QUALITY PROTEIN:
           conserved hypothetical protein [Streptomyces sp. C]
          Length = 81

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 45/81 (55%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
 Frame = +2

Query: 47  PHQLTFRHRAGVTPYTSSCDFAEPCVFVKQLPPPGLCPHYPL-----ARAMGLLIPKLRR 211
           P  LTF+HRAGV+PYTS   FA  CVF KQ    GLC H  L     +  M  L+PKLR 
Sbjct: 1   PVPLTFQHRAGVSPYTSPYGFARTCVFSKQSLLAGLCGHPQLREQVSSPGMAPLLPKLRG 60

Query: 212 *IAEFLQHSSLKRLGILYQST 274
             AEFL HSS +RLGILY +T
Sbjct: 61  HFAEFLNHSSPERLGILYLTT 81


>ref|ZP_02079996.1| hypothetical protein CLOLEP_01448 [Clostridium leptum DSM 753]
           gi|156868565|gb|EDO61937.1| hypothetical protein
           CLOLEP_01448 [Clostridium leptum DSM 753]
          Length = 139

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/80 (56%), Positives = 49/80 (61%)
 Frame = +2

Query: 56  LTFRHRAGVTPYTSSCDFAEPCVFVKQLPPPGLCPHYPLARAMGLLIPKLRR*IAEFLQH 235
           LTF+HRAGV+PYTSS D AE CVF KQ P P  C     A     L PKLR   AEFL +
Sbjct: 46  LTFQHRAGVSPYTSSFDLAETCVFAKQSPGPIHCGSISGAS----LFPKLRDQFAEFLNY 101

Query: 236 SSLKRLGILYQSTCVGFGYG 295
            S   L IL+ STCVG  YG
Sbjct: 102 PSPVGLRILFLSTCVGLRYG 121


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