BLASTX nr result

ID: Atractylodes21_contig00042683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042683
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]    55   6e-06
ref|XP_002277401.1| PREDICTED: transcriptional activator DEMETER...    55   8e-06

>emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]
          Length = 1824

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
 Frame = +1

Query: 55  SNSTNIQQYG--RLNHTTDLNLPPETVIEPQVSTGLPSRFIPVTPDQSRRAEHKLVASET 228
           +++ ++ QYG     H  DLN PPE++ E  VS    S F P+TPD++RR E+  VA   
Sbjct: 86  TSAPDMNQYGLPTYRHFYDLNSPPESMAEA-VSGSTISHFAPITPDKNRRVENSWVAKSQ 144

Query: 229 VISNEDGRTNLAANNNK---------KRSNLDEQPQQLIVEQSQADVSTLVEANQDIEKG 381
            +  E+          K            + D +  Q   + S A VS+ +  N +++ G
Sbjct: 145 NLCPEEKTVQETEKQEKAIDTTRVEVNHLHCDSKLLQSPTDLSFAPVSSPLNENANLDNG 204

Query: 382 -------LTQETN----------LNETPQPKQRRRK 438
                  LT+  N          LN+TPQ K RR+K
Sbjct: 205 GNHAIGPLTENCNFDKRGDHIIDLNKTPQQKPRRKK 240


>ref|XP_002277401.1| PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera]
          Length = 1942

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 28/156 (17%)
 Frame = +1

Query: 55  SNSTNIQQYG--RLNHTTDLNLPPETVIEPQVSTGLPSRFIPVTPDQSRRAEHKLVASET 228
           +++ ++ QYG     H  DLN PPE++ E  VS    S F P+TPD++RR E+  VA   
Sbjct: 183 TSAPDMNQYGLPTYRHFYDLNSPPESMAEA-VSGSAISHFAPITPDKNRRVENSWVAKSQ 241

Query: 229 VISNEDGRTNLAANNNK---------KRSNLDEQPQQLIVEQSQADVSTLVEANQDIEKG 381
            +  E+          K            + D +  Q   + S A VS+ +  N +++ G
Sbjct: 242 NLCPEEKTVQETEKQEKAIDTTRVEVNHLHCDSKLLQSPTDLSFAPVSSPLNENVNLDNG 301

Query: 382 -------LTQETN----------LNETPQPKQRRRK 438
                  LT+  N          LN+TPQ K RR+K
Sbjct: 302 GNHAIGPLTENCNFDKRGDHIIDLNKTPQQKPRRKK 337


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