BLASTX nr result

ID: Atractylodes21_contig00042564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042564
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]   140   1e-31
ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cy...   138   4e-31
emb|CBI36032.3| unnamed protein product [Vitis vinifera]              138   4e-31
ref|XP_002515938.1| polyadenylate-binding protein, putative [Ric...   128   4e-28
ref|XP_002299747.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28

>emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
          Length = 555

 Score =  140 bits (352), Expect = 1e-31
 Identities = 71/117 (60%), Positives = 86/117 (73%), Gaps = 7/117 (5%)
 Frame = +2

Query: 5   PPPPVL----PPHSDFPF---SLYAGDLHPDVTESELYILFSMIGPLRNVHICRDRLSRK 163
           PPPP L    PP   F     +LY GDL P+V+E EL  +FS +GPL +V +CRD LS K
Sbjct: 9   PPPPQLLHPPPPSPGFELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGK 68

Query: 164 SLCYAYINFCFPSHAADALSRLNHTELRGKPIRIMWCQRDPILRKTGIANLFVKNLD 334
           SLCYAY+NF +PS A+ AL+ LNHT+L GKP+RIMW  RDP+ RKTG+ANLFVKNLD
Sbjct: 69  SLCYAYVNFFYPSDASKALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLD 125


>ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
           nuclear-like [Vitis vinifera]
          Length = 630

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/117 (60%), Positives = 85/117 (72%), Gaps = 7/117 (5%)
 Frame = +2

Query: 5   PPPPVL----PPHSDFPF---SLYAGDLHPDVTESELYILFSMIGPLRNVHICRDRLSRK 163
           PPPP L    PP   F     +LY GDL P+V+E EL  +FS +GPL +V +CRD LS K
Sbjct: 9   PPPPQLLHPPPPSPGFELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGK 68

Query: 164 SLCYAYINFCFPSHAADALSRLNHTELRGKPIRIMWCQRDPILRKTGIANLFVKNLD 334
           SLCYAY+NF  PS A+ AL+ LNHT+L GKP+RIMW  RDP+ RKTG+ANLFVKNLD
Sbjct: 69  SLCYAYVNFFHPSDASKALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLD 125


>emb|CBI36032.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/117 (60%), Positives = 85/117 (72%), Gaps = 7/117 (5%)
 Frame = +2

Query: 5   PPPPVL----PPHSDFPF---SLYAGDLHPDVTESELYILFSMIGPLRNVHICRDRLSRK 163
           PPPP L    PP   F     +LY GDL P+V+E EL  +FS +GPL +V +CRD LS K
Sbjct: 9   PPPPQLLHPPPPSPGFELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGK 68

Query: 164 SLCYAYINFCFPSHAADALSRLNHTELRGKPIRIMWCQRDPILRKTGIANLFVKNLD 334
           SLCYAY+NF  PS A+ AL+ LNHT+L GKP+RIMW  RDP+ RKTG+ANLFVKNLD
Sbjct: 69  SLCYAYVNFFHPSDASKALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLD 125


>ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
           gi|223544843|gb|EEF46358.1| polyadenylate-binding
           protein, putative [Ricinus communis]
          Length = 608

 Score =  128 bits (322), Expect = 4e-28
 Identities = 60/96 (62%), Positives = 73/96 (76%)
 Frame = +2

Query: 47  SLYAGDLHPDVTESELYILFSMIGPLRNVHICRDRLSRKSLCYAYINFCFPSHAADALSR 226
           SLY GDL P+VTE  L  +FS +GP+RNVH+CR  L+ +SLCY Y+NF  P  A  ALS 
Sbjct: 20  SLYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSLCYGYVNFYRPYDAYKALSN 79

Query: 227 LNHTELRGKPIRIMWCQRDPILRKTGIANLFVKNLD 334
           LNHT L+GK +RIMWCQR+P  RK+GI NL+VKNLD
Sbjct: 80  LNHTYLKGKLMRIMWCQRNPCARKSGIGNLYVKNLD 115


>ref|XP_002299747.1| predicted protein [Populus trichocarpa] gi|222847005|gb|EEE84552.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score =  128 bits (321), Expect = 5e-28
 Identities = 59/96 (61%), Positives = 73/96 (76%)
 Frame = +2

Query: 47  SLYAGDLHPDVTESELYILFSMIGPLRNVHICRDRLSRKSLCYAYINFCFPSHAADALSR 226
           SLY GDL P+VTE++L   F  +GP+ ++ +CR RL+ KSLCYAY+N    + A+ AL  
Sbjct: 18  SLYVGDLDPEVTETDLRAAFYHVGPISSLRLCRCRLTGKSLCYAYVNLYSHAQASRALGL 77

Query: 227 LNHTELRGKPIRIMWCQRDPILRKTGIANLFVKNLD 334
           LNHT L+GKP+RIMWCQRDP  RKTG ANLFVKNLD
Sbjct: 78  LNHTNLKGKPMRIMWCQRDPFARKTGFANLFVKNLD 113


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