BLASTX nr result

ID: Atractylodes21_contig00042546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042546
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21323.3| unnamed protein product [Vitis vinifera]              208   4e-52
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   208   4e-52
ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containi...   184   5e-45
ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containi...   184   5e-45
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...   183   1e-44

>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  208 bits (529), Expect = 4e-52
 Identities = 101/161 (62%), Positives = 127/161 (78%)
 Frame = -1

Query: 484 CRHSLNPTLVSQVIDPFLIYHHSLALGFFNWASQQPGFTHTSLSYHSILKSLSISHQFTA 305
           C   L+P+LV++VIDPFL++HHSLALGFF WASQ+PGF HTS+SY S+LKSLSIS QF A
Sbjct: 42  CHELLSPSLVARVIDPFLLHHHSLALGFFYWASQKPGFAHTSISYQSVLKSLSISRQFNA 101

Query: 304 VDRLMKQAKILKIQLHPSVYRSVIASNIAGKKALNAFSVYSNVTSLISDIGADTCNSLVA 125
           V+RL+K  K  KI L  SVYRSVIAS+I GK+  NAF +++ V++L  +IG DTCNSLVA
Sbjct: 102 VERLLKDVKAQKIVLDSSVYRSVIASHIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVA 161

Query: 124 ALSSAGNMGYAQQVFDDMISRGVRFTTLGLGVFLWKFCLTA 2
           AL+S G + YAQ+VFD+MI  GV   +LG GVF+W+FC  A
Sbjct: 162 ALASDGCVVYAQRVFDEMIHHGVPLNSLGFGVFIWRFCRNA 202


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  208 bits (529), Expect = 4e-52
 Identities = 101/161 (62%), Positives = 127/161 (78%)
 Frame = -1

Query: 484 CRHSLNPTLVSQVIDPFLIYHHSLALGFFNWASQQPGFTHTSLSYHSILKSLSISHQFTA 305
           C   L+P+LV++VIDPFL++HHSLALGFF WASQ+PGF HTS+SY S+LKSLSIS QF A
Sbjct: 42  CHELLSPSLVARVIDPFLLHHHSLALGFFYWASQKPGFAHTSISYQSVLKSLSISRQFNA 101

Query: 304 VDRLMKQAKILKIQLHPSVYRSVIASNIAGKKALNAFSVYSNVTSLISDIGADTCNSLVA 125
           V+RL+K  K  KI L  SVYRSVIAS+I GK+  NAF +++ V++L  +IG DTCNSLVA
Sbjct: 102 VERLLKDVKAQKIVLDSSVYRSVIASHIIGKRTQNAFLIFNEVSALSREIGPDTCNSLVA 161

Query: 124 ALSSAGNMGYAQQVFDDMISRGVRFTTLGLGVFLWKFCLTA 2
           AL+S G + YAQ+VFD+MI  GV   +LG GVF+W+FC  A
Sbjct: 162 ALASDGCVVYAQRVFDEMIHHGVPLNSLGFGVFIWRFCRNA 202


>ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 640

 Score =  184 bits (468), Expect = 5e-45
 Identities = 94/157 (59%), Positives = 116/157 (73%)
 Frame = -1

Query: 481 RHSLNPTLVSQVIDPFLIYHHSLALGFFNWASQQPGFTHTSLSYHSILKSLSISHQFTAV 302
           R  LNP+LVSQVIDP L+ HHSLALGFFNWASQQPGFTH S SY+SILKSLS+S  F  +
Sbjct: 43  RQMLNPSLVSQVIDPHLLSHHSLALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPI 102

Query: 301 DRLMKQAKILKIQLHPSVYRSVIASNIAGKKALNAFSVYSNVTSLISDIGADTCNSLVAA 122
             L+KQ K  KI L  SVYR+VI S I  KK  +AF V++ VTS+   IG++ CNSL+AA
Sbjct: 103 HSLLKQVKTQKIGLDLSVYRAVIDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAA 162

Query: 121 LSSAGNMGYAQQVFDDMISRGVRFTTLGLGVFLWKFC 11
           L+S G   +AQ+VFD+M  + + F TLG GVF+W+ C
Sbjct: 163 LASDGFFEHAQKVFDEMSLKSIPFNTLGFGVFIWRIC 199


>ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 635

 Score =  184 bits (468), Expect = 5e-45
 Identities = 94/157 (59%), Positives = 116/157 (73%)
 Frame = -1

Query: 481 RHSLNPTLVSQVIDPFLIYHHSLALGFFNWASQQPGFTHTSLSYHSILKSLSISHQFTAV 302
           R  LNP+LVSQVIDP L+ HHSLALGFFNWASQQPGFTH S SY+SILKSLS+S  F  +
Sbjct: 43  RQMLNPSLVSQVIDPHLLSHHSLALGFFNWASQQPGFTHNSDSYNSILKSLSLSRHFGPI 102

Query: 301 DRLMKQAKILKIQLHPSVYRSVIASNIAGKKALNAFSVYSNVTSLISDIGADTCNSLVAA 122
             L+KQ K  KI L  SVYR+VI S I  KK  +AF V++ VTS+   IG++ CNSL+AA
Sbjct: 103 HSLLKQVKTQKIGLDLSVYRAVIDSLIIAKKTHDAFLVFNEVTSITHIIGSELCNSLLAA 162

Query: 121 LSSAGNMGYAQQVFDDMISRGVRFTTLGLGVFLWKFC 11
           L+S G   +AQ+VFD+M  + + F TLG GVF+W+ C
Sbjct: 163 LASDGFFEHAQKVFDEMSLKSIPFNTLGFGVFIWRIC 199


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score =  183 bits (465), Expect = 1e-44
 Identities = 89/157 (56%), Positives = 119/157 (75%)
 Frame = -1

Query: 481 RHSLNPTLVSQVIDPFLIYHHSLALGFFNWASQQPGFTHTSLSYHSILKSLSISHQFTAV 302
           R  L+P+LV  VIDPFL  HHSLALGFFNWASQQPGF+HT  ++HS+LKSLS ++ F+A+
Sbjct: 39  RQRLSPSLVGNVIDPFLKSHHSLALGFFNWASQQPGFSHTPFTFHSLLKSLSHTNHFSAI 98

Query: 301 DRLMKQAKILKIQLHPSVYRSVIASNIAGKKALNAFSVYSNVTSLISDIGADTCNSLVAA 122
             L+KQAK L   + PS++ S+IAS++A  +A  AFS+Y  V SL ++IG  T NSL+AA
Sbjct: 99  HSLLKQAKALNFPIQPSLFSSIIASHVARNRARQAFSLYCGVGSLSAEIGVATSNSLLAA 158

Query: 121 LSSAGNMGYAQQVFDDMISRGVRFTTLGLGVFLWKFC 11
           L+S G +  A++VFD+M  RGV F+TLG GVF+W+ C
Sbjct: 159 LASDGCLESARRVFDEMSERGVGFSTLGFGVFVWRVC 195