BLASTX nr result

ID: Atractylodes21_contig00042263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042263
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]    64   2e-08
emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]    64   2e-08
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]    64   2e-08
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...    62   5e-08
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]    61   8e-08

>emb|CAN80491.1| hypothetical protein VITISV_042679 [Vitis vinifera]
          Length = 1412

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
 Frame = -2

Query: 316 NIPKKT-WIPNQKRRTLSPAEFDEKKAKGLCYFCDEKYEVGHRCKGRKPQFYHI-----X 155
           NIPK    I  +  R  S  + DE++AKGLC++CDEK+  GH+CK ++     I      
Sbjct: 291 NIPKTNPGITTRNHRNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQVETDG 350

Query: 154 XXXXXXXXXXXXXXXXXXAQISVNALEGNDVYQTMRVTGHFGKRTLQILMD 2
                              Q+S+NAL  N+  QTM + G++  R+L +L+D
Sbjct: 351 EGPEGNLQMEGLXEEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLID 401


>emb|CAN62821.1| hypothetical protein VITISV_013041 [Vitis vinifera]
          Length = 1357

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
 Frame = -2

Query: 316 NIPKKT-WIPNQKRRTLSPAEFDEKKAKGLCYFCDEKYEVGHRCKGRKPQFYHI-----X 155
           NIPK    I  +  R  S  + DE++AKGLC++CDEK+  GH+CK ++     I      
Sbjct: 251 NIPKTNPGITTRNHRNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQVETDG 310

Query: 154 XXXXXXXXXXXXXXXXXXAQISVNALEGNDVYQTMRVTGHFGKRTLQILMD 2
                              Q+S+NAL  N+  QTM + G++  R+L +L+D
Sbjct: 311 EGPEGNLQMEGLGEEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLID 361


>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
 Frame = -2

Query: 316 NIPKKT-WIPNQKRRTLSPAEFDEKKAKGLCYFCDEKYEVGHRCKGRKPQFYHI-----X 155
           NIPK    I  +  R  S  + DE++AKGLC++CDEK+  GH+CK ++     I      
Sbjct: 343 NIPKTNPGITTRNHRNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQVETDG 402

Query: 154 XXXXXXXXXXXXXXXXXXAQISVNALEGNDVYQTMRVTGHFGKRTLQILMD 2
                              Q+S+NAL  N+  QTM + G++  R+L +L+D
Sbjct: 403 EGPEGNLQMEGLGKEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLID 453


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
           thaliana] gi|10998138|dbj|BAB03109.1| retroelement pol
           polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
 Frame = -2

Query: 289 NQKRRTLSPAEFDEKKAKGLCYFCDEKYEVGHRCKGRKPQFYH--IXXXXXXXXXXXXXX 116
           +Q+ + +S  E  ++++KGLCYFCDEKY   H    +K Q +   +              
Sbjct: 309 SQQPKKMSQQEMSDRRSKGLCYFCDEKYTPEHYLVHKKTQLFRMDVDEEFEDAREELVND 368

Query: 115 XXXXXAQISVNALEGNDVYQTMRVTGHFGKRTLQILMD 2
                 QISVNA+ G   Y+TMRV G + K+ + IL+D
Sbjct: 369 DDEHMPQISVNAVSGIAGYKTMRVKGTYDKKIIFILID 406


>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
          Length = 1371

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
 Frame = -2

Query: 316 NIPKKT-WIPNQKRRTLSPAEFDEKKAKGLCYFCDEKYEVGHRCKGRKPQFYHI-----X 155
           NIPK    I  +     S  + DE++AKGLC++CDEK+  GH+CK ++     I      
Sbjct: 291 NIPKTNPGITTRNHXNFSNRDLDERRAKGLCFWCDEKFTPGHKCKRKQLYVMQIQVETDG 350

Query: 154 XXXXXXXXXXXXXXXXXXAQISVNALEGNDVYQTMRVTGHFGKRTLQILMD 2
                              Q+S+NAL  N+  QTM + G++  R+L +L+D
Sbjct: 351 EGPEGNLQMEGLGEEDEQIQLSLNALMSNEDSQTMTLNGNYKGRSLFVLID 401


Top