BLASTX nr result

ID: Atractylodes21_contig00042043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00042043
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520087.1| origin recognition complex subunit, putative...    64   1e-08
ref|XP_002319778.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
emb|CBI26465.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002520087.1| origin recognition complex subunit, putative [Ricinus communis]
           gi|223540851|gb|EEF42411.1| origin recognition complex
           subunit, putative [Ricinus communis]
          Length = 715

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
 Frame = -1

Query: 287 ALDLPSCMRS--AEPKSEAWLGGTSKMKELLNLWSRVVLCLYDAGKNQKTTLLDLYYEAL 114
           A +LPSC+R    E   +  + G S++K+L + WS +V+CLY+AGK  K  LLDL+ EAL
Sbjct: 390 AFELPSCLRKKMVEQNGDTLVHGLSELKKLCSQWSNIVMCLYEAGKCDKVRLLDLFCEAL 449

Query: 113 DPK 105
           DP+
Sbjct: 450 DPE 452


>ref|XP_002319778.1| predicted protein [Populus trichocarpa] gi|222858154|gb|EEE95701.1|
           predicted protein [Populus trichocarpa]
          Length = 693

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/56 (48%), Positives = 38/56 (67%)
 Frame = -1

Query: 257 AEPKSEAWLGGTSKMKELLNLWSRVVLCLYDAGKNQKTTLLDLYYEALDPKVYNLR 90
           A+   E  + G +++K+L   WS V+LCLY+AGK  K TLLDL+ EALDP+ +  R
Sbjct: 381 AKQHGETLVNGLAELKKLQCQWSIVILCLYEAGKCDKVTLLDLFCEALDPESFKSR 436


>emb|CBI26465.3| unnamed protein product [Vitis vinifera]
          Length = 4326

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
 Frame = -1

Query: 287  ALDLPSCMRS--AEPKSEAWLGGTSKMKELLNLWSRVVLCLYDAGKNQKTTLLDLYYEAL 114
            A DLPSC R+   E   E      S++K L   WS  VLCLY+AGK  K  LLDL+ EA+
Sbjct: 3978 AFDLPSCRRNNTEERTGENLAHDLSELKRLQKCWSTTVLCLYEAGKYNKIQLLDLFCEAV 4037

Query: 113  DPKVYNLRHSEY 78
             P + N   S +
Sbjct: 4038 VPCLGNSTASNH 4049


Top