BLASTX nr result
ID: Atractylodes21_contig00041956
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00041956
(537 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin... 125 4e-36
ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin... 121 4e-35
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin... 120 2e-32
ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containin... 115 4e-32
ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containin... 114 1e-31
>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
protein product [Vitis vinifera]
Length = 484
Score = 125 bits (313), Expect(2) = 4e-36
Identities = 59/95 (62%), Positives = 70/95 (73%), Gaps = 3/95 (3%)
Frame = +3
Query: 96 PPPLYKTSERSRPTPPTFFIDNPLSHPNIYKHHQQQM--LVSDFPERPGQIACSYFMKTG 269
PPP ERS PP F I+N + N+Y HHQQQ L+ DFPERPGQ CSYF+KTG
Sbjct: 324 PPP-----ERSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTG 378
Query: 270 DCKYRSACKFHHPKNRIP-TPPPVVCNKGLPLRPD 371
DCK+R+ACK+HHPKNRIP +PP + +KGLPLRPD
Sbjct: 379 DCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPD 413
Score = 51.6 bits (122), Expect(2) = 4e-36
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 371 CTNYSRNGICKHGPACKYDHPVNSSNS 451
CT+Y+R GICK GPACK+DHPVN NS
Sbjct: 417 CTHYNRYGICKFGPACKFDHPVNYGNS 443
Score = 57.0 bits (136), Expect(2) = 9e-11
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 156 DNPLSHPN-IYKHHQQQMLVSDFPERPGQIACSYFMKTGDCKYRSACKFHHPKNRIPTPP 332
++P+ N + K ++ +FPERPGQ C Y+++TG CK+ AC+++H K + P
Sbjct: 153 NHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVP 212
Query: 333 PVVCN-KGLPLR 365
+ N GLP+R
Sbjct: 213 VLELNFLGLPIR 224
Score = 34.3 bits (77), Expect(2) = 9e-11
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 371 CTNYSRNGICKHGPACKYDHPVNSSNSIATGGY 469
C Y R G CK+G C+++HP + A GGY
Sbjct: 230 CPYYMRTGSCKYGANCRFNHP----DPTAAGGY 258
Score = 45.8 bits (107), Expect(2) = 1e-06
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 219 FPERPGQIACSYFMKTGDCKYRSACKFHHPKNR 317
+P RP + CS++++TG CK+ S CKF+HP R
Sbjct: 126 YPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRR 158
Score = 31.2 bits (69), Expect(2) = 1e-06
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 362 KT*CTNYSRNGICKHGPACKYDH 430
+T C Y R G CK G AC+Y+H
Sbjct: 181 QTECKYYLRTGGCKFGKACRYNH 203
>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
[Vitis vinifera]
Length = 481
Score = 121 bits (304), Expect(2) = 4e-35
Identities = 55/87 (63%), Positives = 67/87 (77%), Gaps = 3/87 (3%)
Frame = +3
Query: 120 ERSRPTPPTFFIDNPLSHPNIYKHHQQQM--LVSDFPERPGQIACSYFMKTGDCKYRSAC 293
+RS PP F I+N + N+Y HHQQQ L+ DFPERPGQ CSYF+KTGDCK+R+AC
Sbjct: 324 KRSMHPPPAFVINNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAAC 383
Query: 294 KFHHPKNRIP-TPPPVVCNKGLPLRPD 371
K+HHPKNRIP +PP + +KGLPLRPD
Sbjct: 384 KYHHPKNRIPKSPPCTLSDKGLPLRPD 410
Score = 51.6 bits (122), Expect(2) = 4e-35
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +2
Query: 371 CTNYSRNGICKHGPACKYDHPVNSSNS 451
CT+Y+R GICK GPACK+DHPVN NS
Sbjct: 414 CTHYNRYGICKFGPACKFDHPVNYGNS 440
Score = 57.0 bits (136), Expect(2) = 9e-11
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +3
Query: 156 DNPLSHPN-IYKHHQQQMLVSDFPERPGQIACSYFMKTGDCKYRSACKFHHPKNRIPTPP 332
++P+ N + K ++ +FPERPGQ C Y+++TG CK+ AC+++H K + P
Sbjct: 153 NHPIRRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVP 212
Query: 333 PVVCN-KGLPLR 365
+ N GLP+R
Sbjct: 213 VLELNFLGLPIR 224
Score = 34.3 bits (77), Expect(2) = 9e-11
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 371 CTNYSRNGICKHGPACKYDHPVNSSNSIATGGY 469
C Y R G CK+G C+++HP + A GGY
Sbjct: 230 CPYYMRTGSCKYGANCRFNHP----DPTAAGGY 258
Score = 45.8 bits (107), Expect(2) = 1e-06
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 219 FPERPGQIACSYFMKTGDCKYRSACKFHHPKNR 317
+P RP + CS++++TG CK+ S CKF+HP R
Sbjct: 126 YPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRR 158
Score = 31.2 bits (69), Expect(2) = 1e-06
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +2
Query: 362 KT*CTNYSRNGICKHGPACKYDH 430
+T C Y R G CK G AC+Y+H
Sbjct: 181 QTECKYYLRTGGCKFGKACRYNH 203
>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 570
Score = 120 bits (300), Expect(2) = 2e-32
Identities = 57/93 (61%), Positives = 69/93 (74%), Gaps = 3/93 (3%)
Frame = +3
Query: 102 PLYKTSERSRPTPPTFFIDNPLSHPNIYKHHQQQMLVSDFPERPGQIACSYFMKTGDCKY 281
P+Y SERS P T+ ++NP N+Y HHQ+QMLV +FPERPG+ CSYF+KTGDCK+
Sbjct: 421 PVY-LSERSLHPPSTYVMNNPAMESNVYMHHQKQMLVEEFPERPGEPECSYFLKTGDCKF 479
Query: 282 RSACKFHHPKNRIPTPPPVVCN---KGLPLRPD 371
+S CKFHHPKNRI P +CN KGLPLRPD
Sbjct: 480 KSNCKFHHPKNRIARLP--LCNLSDKGLPLRPD 510
Score = 43.9 bits (102), Expect(2) = 2e-32
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = +2
Query: 371 CTNYSRNGICKHGPACKYDHPVNSS 445
CT Y R GICK GPACK+DHP S+
Sbjct: 514 CTYYRRYGICKFGPACKFDHPAPST 538
Score = 46.2 bits (108), Expect(2) = 4e-07
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 225 ERPGQIACSYFMKTGDCKYRSACKFHHPKNRIPTPPPVVCN-KGLPLR 365
ER GQ+ C Y++++G CK+ ACKF+H + + + N GLP+R
Sbjct: 279 ERSGQMECKYYLRSGGCKFGKACKFNHTRGKSSSASATELNFLGLPIR 326
Score = 32.7 bits (73), Expect(2) = 4e-07
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +2
Query: 371 CTNYSRNGICKHGPACKYDHP----VNSSNSIATGGYGLDVSL 487
C Y R G CK G C+++HP V +S + G G +SL
Sbjct: 332 CLYYMRTGSCKFGANCRFNHPDPTTVGGGDSPSGYGNGSSISL 374
>ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 490
Score = 115 bits (288), Expect(2) = 4e-32
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +3
Query: 120 ERSRPTPPTFFIDNPLSHPNIYKHHQQQMLVSDFPERPGQIACSYFMKTGDCKYRSACKF 299
ERS P TF ++NP N+Y HHQ+QM V +FPERPG+ CS+F+KTGDCK++S CKF
Sbjct: 340 ERSIHPPSTFVMNNPAIDTNVYMHHQKQMPVDEFPERPGEPECSFFLKTGDCKFKSNCKF 399
Query: 300 HHPKNRIPTPPPV-VCNKGLPLRPD 371
HHPKNR+ PP + +KGLPLRPD
Sbjct: 400 HHPKNRVTRLPPCNLSDKGLPLRPD 424
Score = 47.8 bits (112), Expect(2) = 4e-32
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2
Query: 371 CTNYSRNGICKHGPACKYDHPVN 439
C++YSR GICK GPACK+DHP+N
Sbjct: 428 CSHYSRYGICKFGPACKFDHPIN 450
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Frame = +3
Query: 225 ERPGQIACSYFMKTGDCKYRSACKFHHPKNRIPTPPPVVCN---KGLPLRP 368
ER G C Y+ ++G CK+ +CK++H + +I T P + GLP+RP
Sbjct: 189 ERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRP 239
Score = 32.7 bits (73), Expect(2) = 2e-07
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 371 CTNYSRNGICKHGPACKYDHPVNSSNSIATGGYG 472
C Y R G CK G CK++HP + A GG G
Sbjct: 244 CPYYMRTGSCKFGANCKFNHP----DPTAVGGGG 273
Score = 42.4 bits (98), Expect(2) = 9e-06
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +3
Query: 219 FPERPGQIACSYFMKTGDCKYRSACKFHHPKNR 317
+P RP C+++MKTG+CK+ CKF+HP R
Sbjct: 140 YPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIKR 172
Score = 32.0 bits (71), Expect(2) = 9e-06
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 365 T*CTNYSRNGICKHGPACKYDH 430
T C Y R+G CK G +CKY+H
Sbjct: 194 TECKYYQRSGGCKFGKSCKYNH 215
>ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 501
Score = 114 bits (284), Expect(2) = 1e-31
Identities = 50/85 (58%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +3
Query: 120 ERSRPTPPTFFIDNPLSHPNIYKHHQQQMLVSDFPERPGQIACSYFMKTGDCKYRSACKF 299
ER+ P TF ++NP N+Y HHQ+QM V +FPERPG+ CSYF+KTGDCK++S CKF
Sbjct: 350 ERNMHPPSTFVMNNPAIDTNVYMHHQKQMPVDEFPERPGEPECSYFLKTGDCKFKSNCKF 409
Query: 300 HHPKNRIPTPPPV-VCNKGLPLRPD 371
+HPKNR+ PP + +KGLPLRPD
Sbjct: 410 NHPKNRVARLPPCNLSDKGLPLRPD 434
Score = 47.8 bits (112), Expect(2) = 1e-31
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2
Query: 371 CTNYSRNGICKHGPACKYDHPVN 439
C++YSR GICK GPACK+DHP+N
Sbjct: 438 CSHYSRYGICKFGPACKFDHPIN 460
Score = 44.7 bits (104), Expect(2) = 4e-07
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 225 ERPGQIACSYFMKTGDCKYRSACKFHHPKNRIPTPPPVVCN---KGLPLR 365
ER G C Y+ ++G CK+ +CK++H + +I T P + GLP+R
Sbjct: 199 ERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIR 248
Score = 34.3 bits (77), Expect(2) = 4e-07
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +2
Query: 371 CTNYSRNGICKHGPACKYDHPVNSSNSIATGGYGLD 478
C Y R G CK G CK++HP + A GG G D
Sbjct: 254 CPYYMRTGSCKFGANCKFNHP----DPTAVGGVGGD 285