BLASTX nr result

ID: Atractylodes21_contig00040495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040495
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34949.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_002274893.1| PREDICTED: putative cyclic nucleotide-gated ...   139   2e-31
emb|CAN80791.1| hypothetical protein VITISV_020548 [Vitis vinifera]   139   2e-31
ref|NP_196991.1| cyclic nucleotide-gated channel 18 [Arabidopsis...   137   7e-31
ref|XP_002873695.1| cyclic nucleotide-gated ion channel 18 [Arab...   137   7e-31

>emb|CBI34949.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/107 (60%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
 Frame = -3

Query: 314 SIGRQHSCWQQGCKEEMASKV--CI-RFLDCNSVNQPERKKWLESTSLRTLCDASNETSP 144
           S+GRQH+CW+  C +E A+ +  C+  FLDC S+   ER+ W+ +T +   CDA    + 
Sbjct: 261 SMGRQHACWKAECAKESAAGISFCLPSFLDCKSLELEERQYWMNATRVVANCDARGHDTE 320

Query: 143 FKFGMFADAFTSEVASSKFFEKYLYCLWWGLRNLSSYGQNLETSIYI 3
           FKFGMFADAFT++VASSKF EKYLYCLWWGL+NLSSYGQ LETSIYI
Sbjct: 321 FKFGMFADAFTNDVASSKFIEKYLYCLWWGLKNLSSYGQTLETSIYI 367


>ref|XP_002274893.1| PREDICTED: putative cyclic nucleotide-gated ion channel 18-like
           [Vitis vinifera]
          Length = 704

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/107 (60%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
 Frame = -3

Query: 314 SIGRQHSCWQQGCKEEMASKV--CI-RFLDCNSVNQPERKKWLESTSLRTLCDASNETSP 144
           S+GRQH+CW+  C +E A+ +  C+  FLDC S+   ER+ W+ +T +   CDA    + 
Sbjct: 235 SMGRQHACWKAECAKESAAGISFCLPSFLDCKSLELEERQYWMNATRVVANCDARGHDTE 294

Query: 143 FKFGMFADAFTSEVASSKFFEKYLYCLWWGLRNLSSYGQNLETSIYI 3
           FKFGMFADAFT++VASSKF EKYLYCLWWGL+NLSSYGQ LETSIYI
Sbjct: 295 FKFGMFADAFTNDVASSKFIEKYLYCLWWGLKNLSSYGQTLETSIYI 341


>emb|CAN80791.1| hypothetical protein VITISV_020548 [Vitis vinifera]
          Length = 833

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/107 (60%), Positives = 81/107 (75%), Gaps = 3/107 (2%)
 Frame = -3

Query: 314 SIGRQHSCWQQGCKEEMASKV--CI-RFLDCNSVNQPERKKWLESTSLRTLCDASNETSP 144
           S+GRQH+CW+  C +E A+ +  C+  FLDC S+   ER+ W+ +T +   CDA    + 
Sbjct: 364 SMGRQHACWKAECAKESAAGISFCLPSFLDCKSLELEERQYWMNATRVVANCDARGHDTE 423

Query: 143 FKFGMFADAFTSEVASSKFFEKYLYCLWWGLRNLSSYGQNLETSIYI 3
           FKFGMFADAFT++VASSKF EKYLYCLWWGL+NLSSYGQ LETSIYI
Sbjct: 424 FKFGMFADAFTNDVASSKFIEKYLYCLWWGLKNLSSYGQTLETSIYI 470


>ref|NP_196991.1| cyclic nucleotide-gated channel 18 [Arabidopsis thaliana]
           gi|38503201|sp|Q9LEQ3.1|CNG18_ARATH RecName:
           Full=Putative cyclic nucleotide-gated ion channel 18;
           AltName: Full=Cyclic nucleotide- and
           calmodulin-regulated ion channel 18
           gi|9755755|emb|CAC01886.1| cyclic nucleotide and
           calmodulin-regulated ion channel-like protein
           [Arabidopsis thaliana] gi|332004701|gb|AED92084.1|
           cyclic nucleotide-gated channel 18 [Arabidopsis
           thaliana]
          Length = 706

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/107 (58%), Positives = 82/107 (76%), Gaps = 3/107 (2%)
 Frame = -3

Query: 314 SIGRQHSCWQQGCKEEMASKV--CI-RFLDCNSVNQPERKKWLESTSLRTLCDASNETSP 144
           SIGRQ SCW   CK++ A +V  C+  FLDC S+ QPER+ W   T + + CDA++ T+ 
Sbjct: 236 SIGRQFSCWSNVCKKDNALRVLDCLPSFLDCKSLEQPERQYWQNVTQVLSHCDATSSTTN 295

Query: 143 FKFGMFADAFTSEVASSKFFEKYLYCLWWGLRNLSSYGQNLETSIYI 3
           FKFGMFA+AFT++VA++ F  KYLYCLWWGLRNLSSYGQN+ TS+Y+
Sbjct: 296 FKFGMFAEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNITTSVYL 342


>ref|XP_002873695.1| cyclic nucleotide-gated ion channel 18 [Arabidopsis lyrata subsp.
           lyrata] gi|297319532|gb|EFH49954.1| cyclic
           nucleotide-gated ion channel 18 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 711

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/107 (58%), Positives = 82/107 (76%), Gaps = 3/107 (2%)
 Frame = -3

Query: 314 SIGRQHSCWQQGCKEEMASKV--CI-RFLDCNSVNQPERKKWLESTSLRTLCDASNETSP 144
           SIGRQ SCW   CK++ A +V  C+  FLDC S+ QPER+ W   T + + CDA++ T+ 
Sbjct: 234 SIGRQFSCWSNVCKKDNALRVLDCLPSFLDCKSLQQPERQYWQNVTQVLSHCDATSSTTN 293

Query: 143 FKFGMFADAFTSEVASSKFFEKYLYCLWWGLRNLSSYGQNLETSIYI 3
           FKFGMFA+AFT++VA++ F  KYLYCLWWGLRNLSSYGQN+ TS+Y+
Sbjct: 294 FKFGMFAEAFTTQVATTDFVSKYLYCLWWGLRNLSSYGQNITTSVYL 340


Top