BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040481
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...    76   3e-12
ref|NP_068729.1| putative reverse transcriptase [Soybean chlorot...    72   5e-11
ref|NP_042513.1| reverse transcriptase [Peanut chlorotic streak ...    59   4e-07

>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus] gi|75559686|sp|Q7TD08.1|POL_CYLCV RecName:
           Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|32305282|gb|AAP78924.1| putative
           multifunctional pol protein [Cestrum yellow leaf curling
           virus]
          Length = 643

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 37/68 (54%), Positives = 48/68 (70%)
 Frame = +3

Query: 108 QQKINPYATFIKVKIQNKNIVALIDTGATLCLGNKRIIKNWEKLEKPLKIIVADKSIHEI 287
           + K NP ATFI VKI +  I A +DTGAT+CL + +I   W K+EKP+KI +ADKS+ EI
Sbjct: 2   KSKGNPNATFITVKINDVFINAYVDTGATICLADPKIKLKWVKMEKPIKISIADKSVQEI 61

Query: 288 WMVAKFVE 311
           W  A+ VE
Sbjct: 62  WHRAEMVE 69


>ref|NP_068729.1| putative reverse transcriptase [Soybean chlorotic mottle virus]
           gi|18266821|sp|P15629.2|POL_SOCMV RecName:
           Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase gi|11322953|emb|CAC16945.1| putative
           reverse transcriptase [Soybean chlorotic mottle virus]
          Length = 692

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/72 (51%), Positives = 47/72 (65%)
 Frame = +3

Query: 114 KINPYATFIKVKIQNKNIVALIDTGATLCLGNKRIIKNWEKLEKPLKIIVADKSIHEIWM 293
           K NP  TFIKV I  +N +A IDTGATLC G ++I  NWE L++P +II+ADKS H I  
Sbjct: 14  KGNPNVTFIKVSIGKRNFLAYIDTGATLCFGKRKISNNWEILKQPKEIIIADKSKHYIRE 73

Query: 294 VAKFVEAEIEKE 329
               V  +IE +
Sbjct: 74  AISNVFLKIENK 85


>ref|NP_042513.1| reverse transcriptase [Peanut chlorotic streak virus]
           gi|555885|gb|AAA50240.1| reverse transcriptase [Peanut
           chlorotic streak virus]
          Length = 694

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/59 (47%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
 Frame = +3

Query: 129 ATFIKVKIQNKNIVALIDTGATLCLGNKRI--IKNWEKLEKPLKIIVADKSIHEIWMVA 299
           ++FIKVK+ NK + A IDTGAT+CL   +I  IK W+K+ KP+K+ +A+  +  IW  A
Sbjct: 6   SSFIKVKLFNKYLYAYIDTGATICLAQAKILPIKYWKKMIKPIKVRIANNKVIHIWYKA 64