BLASTX nr result

ID: Atractylodes21_contig00040468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040468
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447205.1| hypothetical protein SORBIDRAFT_06g030420 [S...    84   8e-16
ref|NP_974953.1| cyclic nucleotide gated channel [Arabidopsis th...    81   8e-14
ref|XP_002864540.1| ATCNGC5 [Arabidopsis lyrata subsp. lyrata] g...    81   8e-14
ref|NP_851209.1| cyclic nucleotide gated channel [Arabidopsis th...    81   8e-14
ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putativ...    78   7e-13

>ref|XP_002447205.1| hypothetical protein SORBIDRAFT_06g030420 [Sorghum bicolor]
           gi|241938388|gb|EES11533.1| hypothetical protein
           SORBIDRAFT_06g030420 [Sorghum bicolor]
          Length = 721

 Score = 83.6 bits (205), Expect(2) = 8e-16
 Identities = 36/57 (63%), Positives = 47/57 (82%)
 Frame = +3

Query: 63  VLGTKKALLWIVIVQYIPRSVRILPLFSELKKTVGVITETAWSCAAYYLVWFVLAGH 233
           VL TK AL+W+V++QYIPR  RI P+ ++LK+T GV  ETAW+ AAYYL+WF+LAGH
Sbjct: 224 VLTTKTALVWVVLIQYIPRLFRIFPVTTDLKRTAGVFIETAWAGAAYYLLWFMLAGH 280



 Score = 24.6 bits (52), Expect(2) = 8e-16
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 233 SVERKSTCWEQACSKDDKC 289
           ++ER+  CW Q C  +  C
Sbjct: 290 TIEREDDCWRQYCDPNTGC 308


>ref|NP_974953.1| cyclic nucleotide gated channel [Arabidopsis thaliana]
           gi|4581205|emb|CAB40130.1| cyclic nucleotide and
           calmodulin-regulated ion channel [Arabidopsis thaliana]
           gi|9758363|dbj|BAB08864.1| cyclic nucleotide and
           calmodulin-regulated ion channel [Arabidopsis thaliana]
           gi|332009592|gb|AED96975.1| cyclic nucleotide gated
           channel [Arabidopsis thaliana]
          Length = 710

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/58 (65%), Positives = 49/58 (84%)
 Frame = +3

Query: 63  VLGTKKALLWIVIVQYIPRSVRILPLFSELKKTVGVITETAWSCAAYYLVWFVLAGHL 236
           VL TK+ALL+IV+VQYIPR +R+LPL SELK+T GV  ETAW+ AAYYL+ ++LA H+
Sbjct: 212 VLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHI 269


>ref|XP_002864540.1| ATCNGC5 [Arabidopsis lyrata subsp. lyrata]
           gi|297310375|gb|EFH40799.1| ATCNGC5 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 717

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/58 (65%), Positives = 49/58 (84%)
 Frame = +3

Query: 63  VLGTKKALLWIVIVQYIPRSVRILPLFSELKKTVGVITETAWSCAAYYLVWFVLAGHL 236
           VL TK+ALL+IV+VQYIPR +R+LPL SELK+T GV  ETAW+ AAYYL+ ++LA H+
Sbjct: 219 VLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHI 276


>ref|NP_851209.1| cyclic nucleotide gated channel [Arabidopsis thaliana]
           gi|42568613|ref|NP_200602.2| cyclic nucleotide gated
           channel [Arabidopsis thaliana]
           gi|38503077|sp|Q8RWS9.1|CNGC5_ARATH RecName:
           Full=Probable cyclic nucleotide-gated ion channel 5;
           Short=AtCNGC5; AltName: Full=Cyclic nucleotide- and
           calmodulin-regulated ion channel 5
           gi|20268758|gb|AAM14082.1| putative cyclic nucleotide
           and calmodulin-regulated ion channel [Arabidopsis
           thaliana] gi|21281123|gb|AAM45101.1| putative cyclic
           nucleotide and calmodulin-regulated ion channel
           [Arabidopsis thaliana] gi|222423973|dbj|BAH19948.1|
           AT5G57940 [Arabidopsis thaliana]
           gi|332009591|gb|AED96974.1| cyclic nucleotide gated
           channel [Arabidopsis thaliana]
           gi|332009593|gb|AED96976.1| cyclic nucleotide gated
           channel [Arabidopsis thaliana]
          Length = 717

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/58 (65%), Positives = 49/58 (84%)
 Frame = +3

Query: 63  VLGTKKALLWIVIVQYIPRSVRILPLFSELKKTVGVITETAWSCAAYYLVWFVLAGHL 236
           VL TK+ALL+IV+VQYIPR +R+LPL SELK+T GV  ETAW+ AAYYL+ ++LA H+
Sbjct: 219 VLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHI 276


>ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223531133|gb|EEF32981.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 735

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 36/58 (62%), Positives = 48/58 (82%)
 Frame = +3

Query: 63  VLGTKKALLWIVIVQYIPRSVRILPLFSELKKTVGVITETAWSCAAYYLVWFVLAGHL 236
           VL TK+ALL+IV++QYIPR +RI PLFSE+K+T GV  ETAW+ AA YL+ ++LA H+
Sbjct: 231 VLATKQALLFIVLLQYIPRFLRIFPLFSEMKRTTGVFAETAWAGAACYLLMYMLASHI 288


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