BLASTX nr result

ID: Atractylodes21_contig00040467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040467
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP50511.1| geranylgeranyltransferase type I beta subunit [Ca...   195   4e-48
ref|XP_002278609.1| PREDICTED: geranylgeranyl transferase type-1...   193   1e-47
ref|XP_002532295.1| geranylgeranyl transferase type I beta subun...   181   5e-44
ref|XP_003552693.1| PREDICTED: geranylgeranyl transferase type-1...   172   2e-41
gb|AFK46661.1| unknown [Lotus japonicus]                              172   3e-41

>gb|AAP50511.1| geranylgeranyltransferase type I beta subunit [Catharanthus roseus]
          Length = 359

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/137 (68%), Positives = 112/137 (81%)
 Frame = -2

Query: 411 DQGSQDQLFDRDRHIRYLEMNYQLLPSPYEGQEINRLTLAYFTISGLHILHALDRVDREA 232
           D  S+ Q FDRDRH+++LEM Y LLPS Y+ QEIN +TLA+F I GL IL ALDR+D++ 
Sbjct: 9   DSDSELQFFDRDRHVQFLEMMYDLLPSRYQSQEINHITLAHFAIVGLDILGALDRIDKQE 68

Query: 231 IINWVLSLQAHPKNEAELNNGQFYGFHGSRSSQFHSLDNGVSVPNNSHLASTYCALAILK 52
           +INWVLSLQAHPKN  EL+NGQFYGFHGSRSSQF S D G +VPN SHLAS+YCAL IL+
Sbjct: 69  VINWVLSLQAHPKNADELDNGQFYGFHGSRSSQFQSNDEGDTVPNVSHLASSYCALTILR 128

Query: 51  TVGYDFSLIDFSSILKS 1
           TVGYDFSL++   IL+S
Sbjct: 129 TVGYDFSLLNSKLILES 145


>ref|XP_002278609.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta [Vitis
           vinifera] gi|296086228|emb|CBI31669.3| unnamed protein
           product [Vitis vinifera]
          Length = 351

 Score =  193 bits (491), Expect = 1e-47
 Identities = 95/134 (70%), Positives = 109/134 (81%)
 Frame = -2

Query: 402 SQDQLFDRDRHIRYLEMNYQLLPSPYEGQEINRLTLAYFTISGLHILHALDRVDREAIIN 223
           S    FDR++H+ +L+M  QLLPS Y+GQEINRLTLAYF ISGLHIL ALD VD+E + +
Sbjct: 6   SSSSFFDREKHVVFLQMMNQLLPSDYQGQEINRLTLAYFAISGLHILGALDEVDKEEVSS 65

Query: 222 WVLSLQAHPKNEAELNNGQFYGFHGSRSSQFHSLDNGVSVPNNSHLASTYCALAILKTVG 43
           WVLSLQAHP+NEAELNNGQF+GFHGSRSSQF   D GV + N SHLASTYCALAILK VG
Sbjct: 66  WVLSLQAHPRNEAELNNGQFFGFHGSRSSQFPRDDKGVLIHNGSHLASTYCALAILKIVG 125

Query: 42  YDFSLIDFSSILKS 1
           Y+FS I+  SIL S
Sbjct: 126 YNFSCINSKSILTS 139


>ref|XP_002532295.1| geranylgeranyl transferase type I beta subunit, putative [Ricinus
           communis] gi|223527997|gb|EEF30079.1| geranylgeranyl
           transferase type I beta subunit, putative [Ricinus
           communis]
          Length = 370

 Score =  181 bits (459), Expect = 5e-44
 Identities = 90/133 (67%), Positives = 108/133 (81%)
 Frame = -2

Query: 399 QDQLFDRDRHIRYLEMNYQLLPSPYEGQEINRLTLAYFTISGLHILHALDRVDREAIINW 220
           Q   F+R+ HI YLEM YQ+LP+ Y+ QEINRLTLAYFTISGLHIL+ALDRVD++A+ +W
Sbjct: 26  QSSSFNREHHIAYLEMMYQMLPNYYQSQEINRLTLAYFTISGLHILNALDRVDKDAVASW 85

Query: 219 VLSLQAHPKNEAELNNGQFYGFHGSRSSQFHSLDNGVSVPNNSHLASTYCALAILKTVGY 40
           VLS QAHP+++++LNNGQFYGF GSRSSQF    NGVSV   SHLAS+Y ALAILK VGY
Sbjct: 86  VLSFQAHPEDKSQLNNGQFYGFQGSRSSQFPLACNGVSVHTLSHLASSYSALAILKIVGY 145

Query: 39  DFSLIDFSSILKS 1
           + S +D  SIL S
Sbjct: 146 NLSNLDSKSILTS 158


>ref|XP_003552693.1| PREDICTED: geranylgeranyl transferase type-1 subunit beta-like
           [Glycine max]
          Length = 347

 Score =  172 bits (437), Expect = 2e-41
 Identities = 79/131 (60%), Positives = 107/131 (81%)
 Frame = -2

Query: 393 QLFDRDRHIRYLEMNYQLLPSPYEGQEINRLTLAYFTISGLHILHALDRVDREAIINWVL 214
           ++ ++D H+R+LE+ Y +LPSPYE QEIN LTLAYF ISGL IL++L +V ++A+I+WVL
Sbjct: 12  EIMEKDAHVRFLELMYYMLPSPYESQEINHLTLAYFVISGLDILNSLHKVAKDAVISWVL 71

Query: 213 SLQAHPKNEAELNNGQFYGFHGSRSSQFHSLDNGVSVPNNSHLASTYCALAILKTVGYDF 34
           S QAHP  +A+LN+GQFYGFHGS++SQF   +NGV + NNSHLASTYCA++ILK VGY+ 
Sbjct: 72  SFQAHPGAKADLNDGQFYGFHGSKTSQFPPDENGVLIHNNSHLASTYCAISILKIVGYEL 131

Query: 33  SLIDFSSILKS 1
           S +D  +I+ S
Sbjct: 132 SNLDSETIVTS 142


>gb|AFK46661.1| unknown [Lotus japonicus]
          Length = 341

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/128 (64%), Positives = 100/128 (78%)
 Frame = -2

Query: 384 DRDRHIRYLEMNYQLLPSPYEGQEINRLTLAYFTISGLHILHALDRVDREAIINWVLSLQ 205
           ++D H+ +L+M YQLLPSPYE QEIN LTLAYF ISGL IL+AL  V++EA+ NWVLS Q
Sbjct: 2   NKDLHVTFLQMMYQLLPSPYESQEINHLTLAYFIISGLDILNALHSVEKEAVANWVLSFQ 61

Query: 204 AHPKNEAELNNGQFYGFHGSRSSQFHSLDNGVSVPNNSHLASTYCALAILKTVGYDFSLI 25
            HP  + + NNGQFYGFHGSR+SQF   +NGV + NNSHLAS+YCALAILK VGYD S +
Sbjct: 62  VHPGTKPDPNNGQFYGFHGSRTSQFPPDENGVLLHNNSHLASSYCALAILKIVGYDLSSL 121

Query: 24  DFSSILKS 1
           D   +L S
Sbjct: 122 DSELMLSS 129


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