BLASTX nr result

ID: Atractylodes21_contig00040452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040452
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317856.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002321935.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_003615476.1| Integral membrane protein-like protein [Medi...    62   4e-08
ref|XP_002515669.1| conserved hypothetical protein [Ricinus comm...    60   2e-07

>ref|XP_002317856.1| predicted protein [Populus trichocarpa] gi|222858529|gb|EEE96076.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 25/137 (18%)
 Frame = -1

Query: 399 VYYDIVKGTGLHRSSSAVEANGV-----DSTAHGKSLVQENTDIKRHNQDDENGLYPVIS 235
           VY+D   G      +S V   GV     D++     ++ +N++I++    D+N     + 
Sbjct: 131 VYFDQHHGADSINGASGVNCGGVTCSVLDTSPRYAEVLVKNSEIQKSLVKDDN-----LQ 185

Query: 234 KEEHQKHDNFSDSSLLPSEISFE--------------------MIKDGVNEITDFDVETV 115
             E+  +  FS S L P E +FE                    +I++   E+T+FDVE V
Sbjct: 186 LGENMDNKGFSGSGLTPLEDTFEEHNFKSKPSDSETRVVGDLHLIEEIDQEMTEFDVEKV 245

Query: 114 LKKQDTHDLYCPNCNSC 64
           L+KQ+THDLYCPNCNSC
Sbjct: 246 LEKQNTHDLYCPNCNSC 262


>ref|XP_002321935.1| predicted protein [Populus trichocarpa] gi|222868931|gb|EEF06062.1|
           predicted protein [Populus trichocarpa]
          Length = 862

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 43/137 (31%), Positives = 67/137 (48%), Gaps = 25/137 (18%)
 Frame = -1

Query: 399 VYYDIVKGTGLHRSSSAVEANGV-----DSTAHGKSLVQENTDIKRHNQDDENGLYPVIS 235
           VY+D  +G       S V   GV     +++     ++ +N++I++    D N     + 
Sbjct: 106 VYFDQNQGADSIDGVSDVRCGGVICSVFETSPGDVEVLIKNSEIQKSLIKDVN-----LQ 160

Query: 234 KEEHQKHDNFSDSSLLPSEISFE--------------------MIKDGVNEITDFDVETV 115
             E+  ++  S SSL P E +FE                    +I++   E+T+ DVE V
Sbjct: 161 SRENLDNEGLSSSSLTPLEGTFEEHNIKSKPSDSETRVVGDLDLIEETDQEVTELDVEKV 220

Query: 114 LKKQDTHDLYCPNCNSC 64
           L+KQ+THDLYCPNCNSC
Sbjct: 221 LEKQNTHDLYCPNCNSC 237


>ref|XP_003615476.1| Integral membrane protein-like protein [Medicago truncatula]
           gi|355516811|gb|AES98434.1| Integral membrane
           protein-like protein [Medicago truncatula]
          Length = 989

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/100 (39%), Positives = 49/100 (49%), Gaps = 11/100 (11%)
 Frame = -1

Query: 330 DSTAHGKSLVQENTDIKRH----NQDDENGLYPVISKEEHQKHDNFSDSSLLPSEISFEM 163
           D T H +S + E  ++ RH    N D  N    V S  E     N SD    P+  S E 
Sbjct: 236 DITNHEESKLDEQVEVHRHHGVQNGDATNHDNKVPSSSELSALHNSSDKQATPAVNSNEE 295

Query: 162 IKDGVNEITD-------FDVETVLKKQDTHDLYCPNCNSC 64
           I   +N I +       +DVE V+ KQ+THDLYCPNC SC
Sbjct: 296 IIQELNSIKETDQQEKEYDVELVIAKQETHDLYCPNCKSC 335


>ref|XP_002515669.1| conserved hypothetical protein [Ricinus communis]
           gi|223545212|gb|EEF46721.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 828

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 25/57 (43%), Positives = 42/57 (73%)
 Frame = -1

Query: 234 KEEHQKHDNFSDSSLLPSEISFEMIKDGVNEITDFDVETVLKKQDTHDLYCPNCNSC 64
           +E++ K  +F++ + +  +  F++I++   E T+ D+E VL+KQ+THDLYCPNCNSC
Sbjct: 226 EEQNSKSVSFNNETRVAGD--FDLIEEADKEETELDIERVLQKQNTHDLYCPNCNSC 280


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