BLASTX nr result

ID: Atractylodes21_contig00040337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040337
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530214.1| pentatricopeptide repeat-containing protein,...   131   6e-29
ref|XP_002330643.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]   124   8e-27
ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat...   123   1e-26
ref|XP_002333576.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26

>ref|XP_002530214.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530261|gb|EEF32161.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 834

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/93 (67%), Positives = 73/93 (78%)
 Frame = -3

Query: 279 LLEEGRRKGREVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMIDKDEVSW 100
           LLEEGRRKGREVH + IR GL+D  VAIGN LINMYAKCG+V DA S F+LM D+D VSW
Sbjct: 261 LLEEGRRKGREVHGFAIRTGLNDIKVAIGNGLINMYAKCGAVDDARSVFRLMNDRDAVSW 320

Query: 99  NSIITGFDQNAYFRDAVMMFCAMRRNQLMPANF 1
           NS+I+GFDQ+  F DAV  +  MRR  LMP+NF
Sbjct: 321 NSMISGFDQSECFEDAVKCYHKMRRTGLMPSNF 353



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/83 (34%), Positives = 53/83 (63%)
 Frame = -3

Query: 258 KGREVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMIDKDEVSWNSIITGF 79
           +G E HA  IR  L+ F+V +G++L++MY+KCG +  A+  F+ M  ++  SWNS+I+G+
Sbjct: 574 RGMEAHACSIRAYLN-FDVVVGSALVDMYSKCGRIDYASRFFESMPLRNLYSWNSMISGY 632

Query: 78  DQNAYFRDAVMMFCAMRRNQLMP 10
            ++     A+ +F  M+ +  +P
Sbjct: 633 ARHGRGDVALQLFTQMKLDGQLP 655


>ref|XP_002330643.1| predicted protein [Populus trichocarpa] gi|222872247|gb|EEF09378.1|
           predicted protein [Populus trichocarpa]
          Length = 777

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/93 (65%), Positives = 71/93 (76%)
 Frame = -3

Query: 279 LLEEGRRKGREVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMIDKDEVSW 100
           LL+EGRRKGREVH Y IR GL+D  VA+GN LINMYAKCG +  A S F LM+DKD VSW
Sbjct: 266 LLDEGRRKGREVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSW 325

Query: 99  NSIITGFDQNAYFRDAVMMFCAMRRNQLMPANF 1
           NS+ITG DQN  F DAV  + +MR+  LMP+NF
Sbjct: 326 NSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNF 358



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 32/83 (38%), Positives = 54/83 (65%)
 Frame = -3

Query: 258 KGREVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMIDKDEVSWNSIITGF 79
           +G EVHA  IR  L   +V IG++L++MY+KCG +  A+  F LM  ++  SWNS+I+G+
Sbjct: 579 RGMEVHACAIRACLES-DVVIGSALVDMYSKCGRIDYASRFFNLMPMRNLYSWNSMISGY 637

Query: 78  DQNAYFRDAVMMFCAMRRNQLMP 10
            ++ Y  +A+ +F  M+ +  +P
Sbjct: 638 ARHGYGDNALRLFTRMKLSGQLP 660


>emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/93 (63%), Positives = 71/93 (76%)
 Frame = -3

Query: 279  LLEEGRRKGREVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMIDKDEVSW 100
            +LEEGRRKGREVHA+VIR GL+D  VAIGN L+NMYAK G++ DA S F+LM++KD VSW
Sbjct: 870  VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 929

Query: 99   NSIITGFDQNAYFRDAVMMFCAMRRNQLMPANF 1
            NS+I+G DQN    DA   F  MRR   MP+NF
Sbjct: 930  NSLISGLDQNECSEDAAESFLRMRRTGSMPSNF 962



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
 Frame = -3

Query: 249  EVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMID-KDEVSWNSIITGFDQ 73
            ++HA V++  LSD + AIGN+L++ Y KCG + +    F  M + +DEVSWNS+I+G+  
Sbjct: 1084 QIHALVLKYCLSD-DTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIH 1142

Query: 72   NAYFRDAV-MMFCAMRRNQ 19
            N     A+ +++  M++ Q
Sbjct: 1143 NELLHKAMDLVWFMMQKGQ 1161



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/76 (36%), Positives = 50/76 (65%)
 Frame = -3

Query: 258  KGREVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMIDKDEVSWNSIITGF 79
            +G EVHA  IR    + +V +G++L++MY+KCG +  A+  F+LM  ++  SWNS+I+G+
Sbjct: 1183 RGMEVHACGIR-ACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGY 1241

Query: 78   DQNAYFRDAVMMFCAM 31
             ++ +   A+ +F  M
Sbjct: 1242 ARHGHGEKALKLFTRM 1257


>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/93 (63%), Positives = 71/93 (76%)
 Frame = -3

Query: 279 LLEEGRRKGREVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMIDKDEVSW 100
           +LEEGRRKGREVHA+VIR GL+D  VAIGN L+NMYAK G++ DA S F+LM++KD VSW
Sbjct: 397 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 456

Query: 99  NSIITGFDQNAYFRDAVMMFCAMRRNQLMPANF 1
           NS+I+G DQN    DA   F  MRR   MP+NF
Sbjct: 457 NSLISGLDQNECSEDAAESFHRMRRTGSMPSNF 489



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 29/76 (38%), Positives = 50/76 (65%)
 Frame = -3

Query: 258 KGREVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMIDKDEVSWNSIITGF 79
           +G EVHA  IR  L   +V +G++L++MY+KCG +  A+  F+LM  ++  SWNS+I+G+
Sbjct: 710 RGMEVHACGIRACLES-DVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGY 768

Query: 78  DQNAYFRDAVMMFCAM 31
            ++ +   A+ +F  M
Sbjct: 769 ARHGHGEKALKLFTRM 784



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
 Frame = -3

Query: 249 EVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMID-KDEVSWNSIITGFDQ 73
           ++HA V++  LSD + AIGN+L++ Y KCG + +    F  M + +DEVSWNS+I+G+  
Sbjct: 611 QIHALVLKYCLSD-DTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIH 669

Query: 72  NAYFRDAV-MMFCAMRRNQ 19
           N     A+ +++  M++ Q
Sbjct: 670 NELLHKAMDLVWFMMQKGQ 688


>ref|XP_002333576.1| predicted protein [Populus trichocarpa] gi|222837227|gb|EEE75606.1|
           predicted protein [Populus trichocarpa]
          Length = 781

 Score =  120 bits (302), Expect = 9e-26
 Identities = 56/88 (63%), Positives = 66/88 (75%)
 Frame = -3

Query: 264 RRKGREVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMIDKDEVSWNSIIT 85
           RRKGR+VH Y IR GL+D  VA+GN LINMYAKCG +  A S F LM+DKD VSWNS+IT
Sbjct: 118 RRKGRQVHGYAIRTGLNDAKVAVGNGLINMYAKCGDIDHARSVFGLMVDKDSVSWNSMIT 177

Query: 84  GFDQNAYFRDAVMMFCAMRRNQLMPANF 1
           G DQN  F DAV  + +MR+  LMP+NF
Sbjct: 178 GLDQNKCFEDAVKSYNSMRKTGLMPSNF 205



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/82 (37%), Positives = 53/82 (64%)
 Frame = -3

Query: 255 GREVHAYVIRNGLSDFNVAIGNSLINMYAKCGSVTDAASAFKLMIDKDEVSWNSIITGFD 76
           G EVHA  IR  L   +V IG++L++MY+KCG +  A+  F LM  ++  SWNS+I+G+ 
Sbjct: 427 GMEVHACAIRACLES-DVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYA 485

Query: 75  QNAYFRDAVMMFCAMRRNQLMP 10
           ++ +  +A+ +F  M+ +  +P
Sbjct: 486 RHGHGDNALRLFTRMKLSGQLP 507


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