BLASTX nr result

ID: Atractylodes21_contig00040178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040178
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|2...   179   2e-43
gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucu...   175   3e-42
ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   168   4e-40
ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   166   2e-39
ref|XP_002518478.1| pentatricopeptide repeat-containing protein,...   157   7e-37

>ref|XP_002316529.1| predicted protein [Populus trichocarpa] gi|222859594|gb|EEE97141.1|
           predicted protein [Populus trichocarpa]
          Length = 678

 Score =  179 bits (454), Expect = 2e-43
 Identities = 98/177 (55%), Positives = 127/177 (71%)
 Frame = +2

Query: 2   EDIIFDSICVNLRQRKWKFLDQILSSNITNSLVNRVVWEFRMSPELVLGFYESIGEQKCF 181
           +D++  +ICVNL+QR+W FL++ L+S +TN+LV+RVV EFR +P+LVL FY  +GE+K  
Sbjct: 54  DDVVLRAICVNLKQRRWNFLEKNLAS-LTNALVSRVVCEFRNTPQLVLEFYNWVGEKKSV 112

Query: 182 SPSLECVCVLIHVMINCKRYDDALVLMNKLMQAMGYSHLEVLEGLWDSYSAEISCPDVFD 361
             SLE  C +IHV++N +RYDDAL LM  LM   G S LEVLE L +SY    S   VFD
Sbjct: 113 LHSLEISCSVIHVLVNSRRYDDALSLMGNLMTVNGLSPLEVLEALNNSYGICESNHAVFD 172

Query: 362 ALVRACTLLGVTNYAYEVIIKLRMEKGFGVSIHAWNNFLSHLISSDEVNNFFKKYDE 532
           ALVRACT +G T  A EVI KL++E G  V+IHAWNNFLSHLI  +E++ F+  Y E
Sbjct: 173 ALVRACTQIGATVGACEVIKKLQIE-GCWVTIHAWNNFLSHLIKVNEIHRFWIVYKE 228


>gb|ADN34051.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 653

 Score =  175 bits (444), Expect = 3e-42
 Identities = 96/177 (54%), Positives = 122/177 (68%)
 Frame = +2

Query: 2   EDIIFDSICVNLRQRKWKFLDQILSSNITNSLVNRVVWEFRMSPELVLGFYESIGEQKCF 181
           EDII+ +ICVNL+QR+WKFL+Q+ S ++TNSLV RVV EFR SP+L L FY  +  +  F
Sbjct: 30  EDIIYKAICVNLKQRRWKFLEQV-SPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNF 88

Query: 182 SPSLECVCVLIHVMINCKRYDDALVLMNKLMQAMGYSHLEVLEGLWDSYSAEISCPDVFD 361
           S SLE  C L+HV++N + ++DAL +M  LM   G S LEVL GL +SY    S P VFD
Sbjct: 89  SHSLESCCTLVHVLVNSRNFNDALSIMESLMLKNGKSPLEVLGGLMNSYEICNSNPAVFD 148

Query: 362 ALVRACTLLGVTNYAYEVIIKLRMEKGFGVSIHAWNNFLSHLISSDEVNNFFKKYDE 532
           ALVR CT L     AY+VI KLR+E GF V+IHAWNNFL+ L+   E + F+  Y E
Sbjct: 149 ALVRTCTQLKSVEGAYDVIRKLRLE-GFWVTIHAWNNFLNLLLKLGETDKFWNMYME 204


>ref|XP_004154237.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 644

 Score =  168 bits (426), Expect = 4e-40
 Identities = 94/177 (53%), Positives = 119/177 (67%)
 Frame = +2

Query: 2   EDIIFDSICVNLRQRKWKFLDQILSSNITNSLVNRVVWEFRMSPELVLGFYESIGEQKCF 181
           EDII  +ICVNL+QR+WKFL+Q LS ++TNSLV RV+ EFR SP+L L FY  +  +  F
Sbjct: 30  EDIICKAICVNLKQRRWKFLEQ-LSPSLTNSLVCRVIREFRNSPQLALEFYNWVEARDNF 88

Query: 182 SPSLECVCVLIHVMINCKRYDDALVLMNKLMQAMGYSHLEVLEGLWDSYSAEISCPDVFD 361
           S SLE  C L+HV++N + ++DAL +M  L+   G S LEVL GL +SY    S P VF 
Sbjct: 89  SHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSPLEVLGGLMNSYEICNSNPAVFX 148

Query: 362 ALVRACTLLGVTNYAYEVIIKLRMEKGFGVSIHAWNNFLSHLISSDEVNNFFKKYDE 532
           ALVR CT L     AY+VI KLR+E GF V+IHAWNNFL+ L+   E + F   Y E
Sbjct: 149 ALVRTCTQLRSVEGAYDVIRKLRLE-GFWVTIHAWNNFLNLLLKLGETDKFXNMYKE 204


>ref|XP_004158042.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g11710, mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  166 bits (420), Expect = 2e-39
 Identities = 93/177 (52%), Positives = 118/177 (66%)
 Frame = +2

Query: 2   EDIIFDSICVNLRQRKWKFLDQILSSNITNSLVNRVVWEFRMSPELVLGFYESIGEQKCF 181
           EDII  +ICVNL+QR+WKFL+Q+ S ++TNSLV RVV EFR SP+L L FY  +  +  F
Sbjct: 30  EDIICKAICVNLKQRRWKFLEQV-SPSLTNSLVCRVVREFRNSPQLALEFYNWVEARDNF 88

Query: 182 SPSLECVCVLIHVMINCKRYDDALVLMNKLMQAMGYSHLEVLEGLWDSYSAEISCPDVFD 361
           S SLE  C L+HV++N + ++DAL +M  L+   G S LEVL GL +SY    S P VF 
Sbjct: 89  SHSLESRCTLVHVLVNSRNFNDALSIMESLILXNGKSPLEVLGGLMNSYEICNSNPAVFX 148

Query: 362 ALVRACTLLGVTNYAYEVIIKLRMEKGFGVSIHAWNNFLSHLISSDEVNNFFKKYDE 532
           A VR CT L     AY+VI KLR+E GF V+IHAWNNFL+ L+   E + F   Y E
Sbjct: 149 ARVRTCTQLRSVEGAYDVIRKLRLE-GFWVTIHAWNNFLNLLLKLGETDKFXNMYKE 204


>ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542323|gb|EEF43865.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 606

 Score =  157 bits (398), Expect = 7e-37
 Identities = 81/151 (53%), Positives = 106/151 (70%)
 Frame = +2

Query: 80  NITNSLVNRVVWEFRMSPELVLGFYESIGEQKCFSPSLECVCVLIHVMINCKRYDDALVL 259
           N+T SLV RV+ +F+ SP+L L F++ + E+K    S+E  CV+IHV++N KRYDDAL +
Sbjct: 4   NMTCSLVGRVICKFQNSPQLALEFHDWVLEKKSVLHSIESCCVVIHVLVNSKRYDDALFI 63

Query: 260 MNKLMQAMGYSHLEVLEGLWDSYSAEISCPDVFDALVRACTLLGVTNYAYEVIIKLRMEK 439
           M  LM   G S LEVL+ L  SY    S P VFDALVR CT +G T  AYEVI KL+++ 
Sbjct: 64  MGNLMNVNGISPLEVLDALISSYDICKSSPAVFDALVRTCTQIGATEGAYEVITKLQLD- 122

Query: 440 GFGVSIHAWNNFLSHLISSDEVNNFFKKYDE 532
           GF V++HAWNNFLSHL+  ++VN F+K Y E
Sbjct: 123 GFWVTVHAWNNFLSHLLKLNDVNRFWKMYKE 153


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