BLASTX nr result

ID: Atractylodes21_contig00040163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040163
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_042512.1| hypothetical protein [Peanut chlorotic streak v...    75   4e-12
ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle...    72   6e-11
gb|AEE01491.1| coat protein [Blueberry red ringspot virus]             71   8e-11
gb|AEH95572.1| coat protein [Blueberry red ringspot virus]             71   8e-11
gb|AEQ49588.1| coat protein [Blueberry red ringspot virus]             70   1e-10

>ref|NP_042512.1| hypothetical protein [Peanut chlorotic streak virus]
           gi|555884|gb|AAA50239.1| putative major capsid protein
           [Peanut chlorotic streak virus]
          Length = 462

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 31/75 (41%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
 Frame = +1

Query: 1   KNCKYWLCQEEGHYANECPKKGKKEQKTEILKMAYDLGYDPIE---DSDVDSEIEIYAYT 171
           K C+ W+CQEEGHYANECP +   ++K + ++M Y +GY+PIE   ++D   + +IY+ T
Sbjct: 388 KTCRCWICQEEGHYANECPNRKINQKKDKYVRMLYSVGYEPIEEDYETDESLDFDIYSLT 447

Query: 172 TDYDTSIESNSSLYE 216
           ++ D+  ES +   E
Sbjct: 448 SETDSETESENEFEE 462


>ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle virus]
           gi|18266819|sp|P15627.2|CAPSD_SOCMV RecName: Full=Capsid
           protein; Short=CP; AltName: Full=Coat protein
           gi|11322952|emb|CAC16944.1| putative coat protein
           [Soybean chlorotic mottle virus]
          Length = 441

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 30/59 (50%), Positives = 45/59 (76%)
 Frame = +1

Query: 1   KNCKYWLCQEEGHYANECPKKGKKEQKTEILKMAYDLGYDPIEDSDVDSEIEIYAYTTD 177
           K C+ WLC EEGHYANECPKK  K  K + LK+ +DLG++P+E SD++++ E++  T++
Sbjct: 379 KKCQCWLCHEEGHYANECPKKDNK--KAQTLKLIFDLGFEPVE-SDIETDEELFELTSE 434


>gb|AEE01491.1| coat protein [Blueberry red ringspot virus]
          Length = 491

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/69 (47%), Positives = 48/69 (69%)
 Frame = +1

Query: 1   KNCKYWLCQEEGHYANECPKKGKKEQKTEILKMAYDLGYDPIEDSDVDSEIEIYAYTTDY 180
           K+CK W+CQE+GHYANECP K K+  K ++L+    +  +PIE++++ SE E++   TD 
Sbjct: 404 KDCKCWICQEDGHYANECPNKDKRRDKVKLLEQLSQVNLEPIENNEI-SEEELWYLQTD- 461

Query: 181 DTSIESNSS 207
           D S E NSS
Sbjct: 462 DESEEENSS 470


>gb|AEH95572.1| coat protein [Blueberry red ringspot virus]
          Length = 495

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/73 (43%), Positives = 49/73 (67%)
 Frame = +1

Query: 1   KNCKYWLCQEEGHYANECPKKGKKEQKTEILKMAYDLGYDPIEDSDVDSEIEIYAYTTDY 180
           K CK W+CQE+GHYANECP K K+  K ++L+    +  +PIE +D+ SE E++   TD 
Sbjct: 408 KECKCWICQEDGHYANECPNKDKRRDKVKLLEQLSQVNLEPIE-NDILSEEELWYLQTDE 466

Query: 181 DTSIESNSSLYEE 219
           ++  ES+S+  E+
Sbjct: 467 ESEEESSSNESEQ 479


>gb|AEQ49588.1| coat protein [Blueberry red ringspot virus]
          Length = 484

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/73 (42%), Positives = 49/73 (67%)
 Frame = +1

Query: 1   KNCKYWLCQEEGHYANECPKKGKKEQKTEILKMAYDLGYDPIEDSDVDSEIEIYAYTTDY 180
           K CK W+CQE+GHYANECP K K+  K ++L+    +  +PIE +D+ SE E++   TD 
Sbjct: 397 KECKCWICQEDGHYANECPNKDKRRDKVKLLEQLSQVNLEPIE-NDIISEEELWYLQTDE 455

Query: 181 DTSIESNSSLYEE 219
           ++  E++S+  E+
Sbjct: 456 ESEEENSSNESEQ 468


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