BLASTX nr result

ID: Atractylodes21_contig00040149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040149
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527150.1| pentatricopeptide repeat-containing protein,...   173   3e-41
ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containi...   170   2e-40
ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containi...   154   1e-35
ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35
ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containi...   142   7e-32

>ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533489|gb|EEF35232.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 874

 Score =  173 bits (438), Expect = 3e-41
 Identities = 93/169 (55%), Positives = 125/169 (73%), Gaps = 1/169 (0%)
 Frame = +1

Query: 136 MKHASELGKVLLNNANNPKLAYQIFKRVASNPNFPSDAFIPSLPLVTRILIGAKMFTQID 315
           M   ++L K LLNNA+NPKLA+ +FKR+ S P   S+    S+P+++RILI +KMF ++D
Sbjct: 1   MDPTTKLTKALLNNAHNPKLAWHLFKRILSLP-ISSNHRSQSIPIISRILIRSKMFNELD 59

Query: 316 ALQQLLLTHPT-ETSHHSMVLLVRVLAKSGHVSLAISHFQALRAHHPNKPPSVSLYNLLI 492
            L QLLL  P+ E+S  S+  LV VLAKSG  + AISHF++LR++ P K PS+ LYN+L+
Sbjct: 60  DLHQLLLNSPSLESSDSSLENLVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLL 119

Query: 493 RSSLRENLPHCVQLLYEDMIVSRVSPETYTFNLLIGGLCDSGCLEDARK 639
           +S +REN    V  LY+DM+++RVSPE YTFNLLIG LCDSG LEDAR+
Sbjct: 120 KSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARE 168


>ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera] gi|297744485|emb|CBI37747.3| unnamed
           protein product [Vitis vinifera]
          Length = 878

 Score =  170 bits (430), Expect = 2e-40
 Identities = 89/172 (51%), Positives = 117/172 (68%), Gaps = 4/172 (2%)
 Frame = +1

Query: 136 MKHASELGKVLLNNANNPKLAYQIFKRVASNP----NFPSDAFIPSLPLVTRILIGAKMF 303
           M   ++L K L+ N +NP LA+ +FKR+ S P    +  S + + S+P++T ILI AKM 
Sbjct: 1   MDQRNKLTKALIKNTHNPTLAWHLFKRILSIPTSSSSISSRSILRSIPIITHILIRAKMI 60

Query: 304 TQIDALQQLLLTHPTETSHHSMVLLVRVLAKSGHVSLAISHFQALRAHHPNKPPSVSLYN 483
           +QID LQQLLL  P E SH S++ L+R+LAKSG   LA S FQ+ R+  P  PP V LYN
Sbjct: 61  SQIDHLQQLLLQQPQEVSHVSLIALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYN 120

Query: 484 LLIRSSLRENLPHCVQLLYEDMIVSRVSPETYTFNLLIGGLCDSGCLEDARK 639
           +++ SSLRE+       LY+DM+V+ VSPETYT NLLI GLCDSG  EDAR+
Sbjct: 121 MVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDARE 172


>ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
           gi|449472527|ref|XP_004153621.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  154 bits (390), Expect = 1e-35
 Identities = 85/172 (49%), Positives = 113/172 (65%), Gaps = 4/172 (2%)
 Frame = +1

Query: 136 MKHASELGKVLLNNANNPKLAYQIFKRVASNPNFPSDAF----IPSLPLVTRILIGAKMF 303
           M  A++L K +  N+NNP LA+ +FKR+ S+P   S +F    + S+P + RILI AKM 
Sbjct: 3   MDRAAKLSKAIYLNSNNPNLAWLLFKRILSSPIPASSSFFKPSLQSVPAIARILITAKMH 62

Query: 304 TQIDALQQLLLTHPTETSHHSMVLLVRVLAKSGHVSLAISHFQALRAHHPNKPPSVSLYN 483
            QID L QLLL+   + +H S   LVR LA  G +  AIS F++LR   P+ PP +S YN
Sbjct: 63  PQIDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYN 122

Query: 484 LLIRSSLRENLPHCVQLLYEDMIVSRVSPETYTFNLLIGGLCDSGCLEDARK 639
           LL R SL+E+   CV  LY+DM V+RV P+TYTFNLLI  LC+ G LE+AR+
Sbjct: 123 LLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENARE 174


>ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  153 bits (387), Expect = 2e-35
 Identities = 84/172 (48%), Positives = 113/172 (65%), Gaps = 4/172 (2%)
 Frame = +1

Query: 136 MKHASELGKVLLNNANNPKLAYQIFKRVASNPNFPSDAF----IPSLPLVTRILIGAKMF 303
           M  A++L K +  N+NNP LA+ +FKR+ S+P   S +F    + S+P + RILI AKM 
Sbjct: 3   MDRAAKLSKAIYLNSNNPNLAWLLFKRILSSPIPASSSFFKPSLQSVPAIARILITAKMH 62

Query: 304 TQIDALQQLLLTHPTETSHHSMVLLVRVLAKSGHVSLAISHFQALRAHHPNKPPSVSLYN 483
            QID L QLLL+   + +H S   LVR LA  G +  AIS F++LR   P+ PP +S YN
Sbjct: 63  PQIDHLHQLLLSQHRDFAHPSGFSLVRTLADLGLLENAISQFRSLRDRFPHDPPPISFYN 122

Query: 484 LLIRSSLRENLPHCVQLLYEDMIVSRVSPETYTFNLLIGGLCDSGCLEDARK 639
           LL R SL+E+   CV  LY+DM V++V P+TYTFNLLI  LC+ G LE+AR+
Sbjct: 123 LLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENARE 174


>ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  142 bits (357), Expect = 7e-32
 Identities = 77/158 (48%), Positives = 106/158 (67%), Gaps = 2/158 (1%)
 Frame = +1

Query: 166 LLNNANNPKLAYQIFKRVASNPNFPSDAFIPSL-PLVTRILIGAKMFTQIDALQQLLLT- 339
           +L N NNPKLA+ + KRV S+P+  S +    L  + TRIL  AKM  ++  L  LLL+ 
Sbjct: 12  VLKNTNNPKLAWHLVKRVISSPSSSSSSSTQHLVTITTRILATAKMHNELHHLHNLLLSS 71

Query: 340 HPTETSHHSMVLLVRVLAKSGHVSLAISHFQALRAHHPNKPPSVSLYNLLIRSSLRENLP 519
           H    +H S++ +VRVLA+ GHV  AI+HF++LRA  P+  PS+ LYNLL+RS+LR + P
Sbjct: 72  HNYHIAHPSLISMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRP 131

Query: 520 HCVQLLYEDMIVSRVSPETYTFNLLIGGLCDSGCLEDA 633
             V  LY DM+ +RV+P+TYTFNLLI  LC+S   + A
Sbjct: 132 GFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHA 169


Top