BLASTX nr result

ID: Atractylodes21_contig00040132 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040132
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-...   145   4e-33
ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arab...   144   6e-33
gb|ABS79043.1| At4g25540-like protein [Arabidopsis halleri subsp...   144   6e-33
gb|ABS79046.1| At4g25540-like protein [Arabidopsis lyrata subsp....   144   6e-33
gb|ABS79053.1| At4g25540-like protein [Arabidopsis lyrata subsp....   144   6e-33

>ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
          Length = 1070

 Score =  145 bits (365), Expect = 4e-33
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = +3

Query: 3   ARNKDYVCPVFVDDSEPVQICISSGRHPVMETVLQDSFVPNDTSLLADGEYCQIITGPNM 182
           +RNK YVCPVFVDD EPVQI ISSGRHPV+ET LQD+FVPNDT++ ADGEYCQI+TGPNM
Sbjct: 735 SRNKGYVCPVFVDDHEPVQIQISSGRHPVLETTLQDNFVPNDTNMHADGEYCQIVTGPNM 794

Query: 183 GGKSCYIRQVALISIMAQVG 242
           GGKSCYIRQVALI IMAQVG
Sbjct: 795 GGKSCYIRQVALIVIMAQVG 814


>ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
           lyrata] gi|297313441|gb|EFH43864.1| hypothetical protein
           ARALYDRAFT_492273 [Arabidopsis lyrata subsp. lyrata]
          Length = 1078

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/80 (85%), Positives = 75/80 (93%)
 Frame = +3

Query: 3   ARNKDYVCPVFVDDSEPVQICISSGRHPVMETVLQDSFVPNDTSLLADGEYCQIITGPNM 182
           ++NK YVCPVFVDD EPV+I I SGRHPV+ET+LQD+FVPNDTSL A+GEYCQIITGPNM
Sbjct: 759 SKNKKYVCPVFVDDCEPVEINIQSGRHPVLETLLQDNFVPNDTSLHAEGEYCQIITGPNM 818

Query: 183 GGKSCYIRQVALISIMAQVG 242
           GGKSCYIRQVALISIMAQVG
Sbjct: 819 GGKSCYIRQVALISIMAQVG 838


>gb|ABS79043.1| At4g25540-like protein [Arabidopsis halleri subsp. halleri]
          Length = 154

 Score =  144 bits (364), Expect = 6e-33
 Identities = 69/80 (86%), Positives = 74/80 (92%)
 Frame = +3

Query: 3   ARNKDYVCPVFVDDSEPVQICISSGRHPVMETVLQDSFVPNDTSLLADGEYCQIITGPNM 182
           +RNK YVCPVFVDD EPV+I I SGRHPV+ET+LQD+FVPNDTSL A GEYCQIITGPNM
Sbjct: 54  SRNKKYVCPVFVDDCEPVEINIQSGRHPVLETLLQDNFVPNDTSLHAKGEYCQIITGPNM 113

Query: 183 GGKSCYIRQVALISIMAQVG 242
           GGKSCYIRQVALISIMAQVG
Sbjct: 114 GGKSCYIRQVALISIMAQVG 133


>gb|ABS79046.1| At4g25540-like protein [Arabidopsis lyrata subsp. petraea]
           gi|154358049|gb|ABS79048.1| At4g25540-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|154358051|gb|ABS79049.1| At4g25540-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|154358053|gb|ABS79050.1| At4g25540-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|154358055|gb|ABS79051.1| At4g25540-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|154358061|gb|ABS79054.1| At4g25540-like protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|154358063|gb|ABS79055.1| At4g25540-like protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|154358081|gb|ABS79064.1| At4g25540-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|154358089|gb|ABS79068.1| At4g25540-like protein
           [Arabidopsis lyrata subsp. petraea]
           gi|154358091|gb|ABS79069.1| At4g25540-like protein
           [Arabidopsis lyrata subsp. petraea]
          Length = 138

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/80 (85%), Positives = 75/80 (93%)
 Frame = +3

Query: 3   ARNKDYVCPVFVDDSEPVQICISSGRHPVMETVLQDSFVPNDTSLLADGEYCQIITGPNM 182
           ++NK YVCPVFVDD EPV+I I SGRHPV+ET+LQD+FVPNDTSL A+GEYCQIITGPNM
Sbjct: 46  SKNKKYVCPVFVDDCEPVEINIQSGRHPVLETLLQDNFVPNDTSLHAEGEYCQIITGPNM 105

Query: 183 GGKSCYIRQVALISIMAQVG 242
           GGKSCYIRQVALISIMAQVG
Sbjct: 106 GGKSCYIRQVALISIMAQVG 125


>gb|ABS79053.1| At4g25540-like protein [Arabidopsis lyrata subsp. petraea]
          Length = 149

 Score =  144 bits (364), Expect = 6e-33
 Identities = 68/80 (85%), Positives = 75/80 (93%)
 Frame = +3

Query: 3   ARNKDYVCPVFVDDSEPVQICISSGRHPVMETVLQDSFVPNDTSLLADGEYCQIITGPNM 182
           ++NK YVCPVFVDD EPV+I I SGRHPV+ET+LQD+FVPNDTSL A+GEYCQIITGPNM
Sbjct: 54  SKNKKYVCPVFVDDCEPVEINIQSGRHPVLETLLQDNFVPNDTSLHAEGEYCQIITGPNM 113

Query: 183 GGKSCYIRQVALISIMAQVG 242
           GGKSCYIRQVALISIMAQVG
Sbjct: 114 GGKSCYIRQVALISIMAQVG 133


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