BLASTX nr result

ID: Atractylodes21_contig00040058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040058
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...   127   1e-27
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...   120   1e-25
ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808...   118   4e-25
gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]...    76   3e-12
emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    61   8e-08

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  127 bits (318), Expect = 1e-27
 Identities = 61/114 (53%), Positives = 80/114 (70%), Gaps = 6/114 (5%)
 Frame = +2

Query: 2    KRALIERYRGRQNVNPFEELKDLKQTGTVDEFITDFEYITSQVGRLPEEQYLGYFVGGLR 181
            K+ALI RY GR+  NPFEEL  L+Q G+V+EF+  FE ++SQVGRLPEEQYLGYF+ GL+
Sbjct: 810  KKALIARYDGRRLENPFEELSTLRQIGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLK 869

Query: 182  SDLRLRVRTFNPRNRLQAMKIARDIEAEIN------GAPLSRSLGSGRTRNWRG 325
            + +R RVRT NP  R+Q M+IA+D+E E+N      G P  +  G  R   W+G
Sbjct: 870  AHIRRRVRTLNPTTRMQMMRIAKDVEDELNEEDDDGGRPYGKKHGGDRVERWKG 923


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/89 (62%), Positives = 72/89 (80%)
 Frame = +2

Query: 2   KRALIERYRGRQNVNPFEELKDLKQTGTVDEFITDFEYITSQVGRLPEEQYLGYFVGGLR 181
           KRALI RY GR+  NPFEEL  L+Q G+V+EF+  FE ++SQVGRLPEEQYLGYF+ GL+
Sbjct: 137 KRALIARYGGRRLENPFEELSTLRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLK 196

Query: 182 SDLRLRVRTFNPRNRLQAMKIARDIEAEI 268
             +R RVRT NPRNR++ M+IA+D+E E+
Sbjct: 197 PQIRRRVRTLNPRNRMEMMRIAKDVEDEL 225


>ref|XP_003544054.1| PREDICTED: uncharacterized protein LOC100808652 [Glycine max]
          Length = 463

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/89 (61%), Positives = 71/89 (79%)
 Frame = +2

Query: 2   KRALIERYRGRQNVNPFEELKDLKQTGTVDEFITDFEYITSQVGRLPEEQYLGYFVGGLR 181
           KRALI RY GR+  NPFEEL  ++Q G+V+EF+  FE ++SQVGRLPEEQYLGYF+ GL+
Sbjct: 120 KRALIARYGGRRLENPFEELSTIRQKGSVEEFVEAFELLSSQVGRLPEEQYLGYFMSGLK 179

Query: 182 SDLRLRVRTFNPRNRLQAMKIARDIEAEI 268
             +R RVRT NP NR+Q M+IA+D+E E+
Sbjct: 180 PQIRRRVRTLNPLNRMQMMRIAKDVEEEL 208


>gb|ABN08404.1| Retrotransposon gag protein [Medicago truncatula]
           gi|124360393|gb|ABN08406.1| Retrotransposon gag protein
           [Medicago truncatula]
          Length = 224

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/69 (50%), Positives = 51/69 (73%)
 Frame = +2

Query: 2   KRALIERYRGRQNVNPFEELKDLKQTGTVDEFITDFEYITSQVGRLPEEQYLGYFVGGLR 181
           K AL+ERY G  + N FE+L  L+Q GT++E+I DFE + +Q+ +LP +QYLGYFV GL+
Sbjct: 147 KDALLERYGGVSDGNVFEQLSALQQEGTIEEYIADFERLVAQLPKLPNDQYLGYFVHGLK 206

Query: 182 SDLRLRVRT 208
             +R +VR+
Sbjct: 207 DKIRGKVRS 215


>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 38/103 (36%), Positives = 53/103 (51%)
 Frame = +2

Query: 5   RALIERYRGRQNVNPFEELKDLKQTGTVDEFITDFEYITSQVGRLPEEQYLGYFVGGLRS 184
           RAL  R+      NP E L  LKQT TV+++ + FE +++Q+  L E   L  F+ GLR 
Sbjct: 120 RALQTRFGSSPYENPMEALIRLKQTSTVEDYKSQFEALSNQLRGLAESYKLSCFLSGLRE 179

Query: 185 DLRLRVRTFNPRNRLQAMKIARDIEAEINGAPLSRSLGSGRTR 313
           D+R  V   NP N   A  +A+  E  +     +  LGS  TR
Sbjct: 180 DIRFMVCMLNPSNLHIAFGLAKMQEENVAALRRTAKLGSVPTR 222


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