BLASTX nr result

ID: Atractylodes21_contig00040003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00040003
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535144.1| dicer-1, putative [Ricinus communis] gi|2235...    61   8e-08
ref|XP_004159229.1| PREDICTED: ribonuclease 3-like protein 3-lik...    60   1e-07
ref|XP_004144598.1| PREDICTED: ribonuclease 3-like protein 3-lik...    60   1e-07
ref|NP_566661.1| RNAse THREE-like protein 2 [Arabidopsis thalian...    59   5e-07
ref|XP_002885372.1| hypothetical protein ARALYDRAFT_479566 [Arab...    58   7e-07

>ref|XP_002535144.1| dicer-1, putative [Ricinus communis] gi|223523936|gb|EEF27239.1|
           dicer-1, putative [Ricinus communis]
          Length = 259

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
 Frame = +2

Query: 77  VEKIISYNF*NKELLNEAFNDASNKSGDCPLNTRLSYVGDSILGFFLP*YTIYIQYPHLE 256
           VE+I+ Y F N+ LL EAF D S+  G C    RL +VGDS+L         Y +YP+L 
Sbjct: 35  VEEILKYKFKNRSLLEEAFTD-SSFPGKCFSYERLEHVGDSVLNLLFT-KEHYFKYPNLP 92

Query: 257 SGAL---------TSALAHVALKHNLYKFL*NQKDCL 340
            GAL         T  LA VA+KH  ++FL ++K  L
Sbjct: 93  PGALTRLRAANVDTEKLARVAVKHGFHRFLRHKKPLL 129


>ref|XP_004159229.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
          Length = 275

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
 Frame = +2

Query: 77  VEKIISYNF*NKELLNEAFNDASNKSGDCPLNTRLSYVGDSILGFFLP*YTIYIQYPHLE 256
           +E I++Y F +K LL EAF DAS    +C    RL YVGDS+L F +     Y   P+L 
Sbjct: 37  IEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLIT-REQYFSNPNLS 95

Query: 257 SGAL---------TSALAHVALKHNLYKFL*NQK 331
            G+L         T  LA VA+ H  +++L + K
Sbjct: 96  PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 129


>ref|XP_004144598.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
          Length = 275

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
 Frame = +2

Query: 77  VEKIISYNF*NKELLNEAFNDASNKSGDCPLNTRLSYVGDSILGFFLP*YTIYIQYPHLE 256
           +E I++Y F +K LL EAF DAS    +C    RL YVGDS+L F +     Y   P+L 
Sbjct: 37  IEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLIT-REQYFSNPNLS 95

Query: 257 SGAL---------TSALAHVALKHNLYKFL*NQK 331
            G+L         T  LA VA+ H  +++L + K
Sbjct: 96  PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 129


>ref|NP_566661.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
           gi|75274109|sp|Q9LTQ0.1|RTL2_ARATH RecName:
           Full=Ribonuclease 3-like protein 2; AltName:
           Full=Ribonuclease III-like protein 2; Short=RNase
           III-like protein 2; AltName: Full=Ribonuclease
           three-like protein 2 gi|9294562|dbj|BAB02825.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|332642855|gb|AEE76376.1| RNAse THREE-like protein 2
           [Arabidopsis thaliana]
          Length = 391

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
 Frame = +2

Query: 77  VEKIISYNF*NKELLNEAFNDASNKSGDCPLNTRLSYVGDSILGFFLP*YTIYIQYPHLE 256
           VEKI++Y F NK LL EA    S    D P   RL ++GDS +G  +  Y +Y+ YP LE
Sbjct: 63  VEKILNYKFSNKSLLKEAITHTS--CTDFPSYERLEFIGDSAIGLAISNY-LYLTYPSLE 119

Query: 257 ---------SGALTSALAHVALKHNLYKFL 319
                    +   T  LA V+L H LY FL
Sbjct: 120 PHDLSLLRAANVSTEKLARVSLNHGLYSFL 149


>ref|XP_002885372.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
           lyrata] gi|297331212|gb|EFH61631.1| hypothetical protein
           ARALYDRAFT_479566 [Arabidopsis lyrata subsp. lyrata]
          Length = 391

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/90 (42%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
 Frame = +2

Query: 77  VEKIISYNF*NKELLNEAFNDASNKSGDCPLNTRLSYVGDSILGFFLP*YTIYIQYPHLE 256
           +EKI++Y F NK LL EA    S    D P   RL +VGDS +G  +  Y +Y+ YP LE
Sbjct: 63  LEKILNYKFKNKSLLKEAITHTS--CTDFPSYERLEFVGDSAIGLAISNY-LYLTYPSLE 119

Query: 257 SGAL---------TSALAHVALKHNLYKFL 319
              L         T  LA V L H LY+FL
Sbjct: 120 PHQLSLLRAANVSTEKLARVTLNHGLYQFL 149


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