BLASTX nr result

ID: Atractylodes21_contig00038995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038995
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632756.1| PREDICTED: DNA replication complex GINS prot...   170   1e-40
ref|XP_004135842.1| PREDICTED: probable DNA replication complex ...   167   8e-40
ref|NP_001174454.1| Os05g0453800 [Oryza sativa Japonica Group] g...   163   2e-38
gb|EAY98271.1| hypothetical protein OsI_20178 [Oryza sativa Indi...   163   2e-38
ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|1956306...   162   3e-38

>ref|XP_003632756.1| PREDICTED: DNA replication complex GINS protein PSF1-like [Vitis
           vinifera] gi|297743415|emb|CBI36282.3| unnamed protein
           product [Vitis vinifera]
          Length = 197

 Score =  170 bits (430), Expect = 1e-40
 Identities = 81/136 (59%), Positives = 103/136 (75%)
 Frame = -2

Query: 408 DLFAQVIEECDGHLLQLQALLRKMQEEGSGNQTTKNADHFGALIHHLSLVRNKRCLMAYV 229
           D+F QV++EC  H L+LQ+L+RK+QEEG   QTT+NADHFG +IHHLSL+RNKRCLMAYV
Sbjct: 27  DMFDQVVKECSTHYLELQSLMRKIQEEGMDIQTTRNADHFGMVIHHLSLMRNKRCLMAYV 86

Query: 228 HNRAEVIQSLGWTIERVLPXXXXXXXXXXXXXXXXKHSATLKSYMSDLDIDLAVDMVPPK 49
           +NRAE+I++L W I  VLP                 HS  L+SYMS+L++DL VDMVPPK
Sbjct: 87  YNRAEIIRNLRWKIGPVLPQEIHEKLSYSEEEYFKNHSTALESYMSELELDLTVDMVPPK 146

Query: 48  DPYIKVRVLEEIGNVV 1
           DPYI+VRVL++IG V+
Sbjct: 147 DPYIQVRVLDDIGEVL 162


>ref|XP_004135842.1| PREDICTED: probable DNA replication complex GINS protein PSF1-like
           [Cucumis sativus] gi|449491012|ref|XP_004158773.1|
           PREDICTED: probable DNA replication complex GINS protein
           PSF1-like [Cucumis sativus]
          Length = 200

 Score =  167 bits (423), Expect = 8e-40
 Identities = 85/134 (63%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
 Frame = -2

Query: 408 DLFAQVIEECDGHLLQLQALLRKMQEEGSGNQTTKNADHFGALIHHLSLVRNKRCLMAYV 229
           DLF QVI EC  H L+LQ+L+RK+QEEG   QTTKN DHFGALIHHL+LVRNKRCLMAYV
Sbjct: 27  DLFEQVISECQQHHLELQSLIRKVQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYV 86

Query: 228 HNRAEVIQSLGW-TIERVLPXXXXXXXXXXXXXXXXKHSATLKSYMSDLDIDLAVDMVPP 52
           HNRAE+I+SL W  +  ++P                KHSA LK YMS L++DL VDMVPP
Sbjct: 87  HNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEYFKKHSARLKEYMSKLELDLTVDMVPP 146

Query: 51  KDPYIKVRVLEEIG 10
           KDPYI+VRVL++IG
Sbjct: 147 KDPYIQVRVLDDIG 160


>ref|NP_001174454.1| Os05g0453800 [Oryza sativa Japonica Group]
           gi|255676414|dbj|BAH93182.1| Os05g0453800 [Oryza sativa
           Japonica Group]
          Length = 263

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/135 (59%), Positives = 97/135 (71%)
 Frame = -2

Query: 408 DLFAQVIEECDGHLLQLQALLRKMQEEGSGNQTTKNADHFGALIHHLSLVRNKRCLMAYV 229
           D+F QVI EC+ H  Q Q+L+RKM E+    +TT+N DH+GA +HHLSL+RNKRCLMAY+
Sbjct: 65  DVFDQVIRECNEHNTQFQSLIRKMVEQNLDIETTRNDDHYGAAVHHLSLLRNKRCLMAYM 124

Query: 228 HNRAEVIQSLGWTIERVLPXXXXXXXXXXXXXXXXKHSATLKSYMSDLDIDLAVDMVPPK 49
           +NRAEVIQS  W I  VLP                 HSA +KSYMS++DIDL VDMVPPK
Sbjct: 125 YNRAEVIQSFRWKIGPVLPHEIQEKLHFSEKEYFKNHSAAIKSYMSEMDIDLTVDMVPPK 184

Query: 48  DPYIKVRVLEEIGNV 4
           DPYI+VRVLE+IG V
Sbjct: 185 DPYIQVRVLEDIGEV 199


>gb|EAY98271.1| hypothetical protein OsI_20178 [Oryza sativa Indica Group]
           gi|222631809|gb|EEE63941.1| hypothetical protein
           OsJ_18766 [Oryza sativa Japonica Group]
          Length = 225

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/135 (59%), Positives = 97/135 (71%)
 Frame = -2

Query: 408 DLFAQVIEECDGHLLQLQALLRKMQEEGSGNQTTKNADHFGALIHHLSLVRNKRCLMAYV 229
           D+F QVI EC+ H  Q Q+L+RKM E+    +TT+N DH+GA +HHLSL+RNKRCLMAY+
Sbjct: 27  DVFDQVIRECNEHNTQFQSLIRKMVEQNLDIETTRNDDHYGAAVHHLSLLRNKRCLMAYM 86

Query: 228 HNRAEVIQSLGWTIERVLPXXXXXXXXXXXXXXXXKHSATLKSYMSDLDIDLAVDMVPPK 49
           +NRAEVIQS  W I  VLP                 HSA +KSYMS++DIDL VDMVPPK
Sbjct: 87  YNRAEVIQSFRWKIGPVLPHEIQEKLHFSEKEYFKNHSAAIKSYMSEMDIDLTVDMVPPK 146

Query: 48  DPYIKVRVLEEIGNV 4
           DPYI+VRVLE+IG V
Sbjct: 147 DPYIQVRVLEDIGEV 161


>ref|NP_001149745.1| GINS complex subunit 1 [Zea mays] gi|195630675|gb|ACG36644.1| DNA
           replication complex GINS protein PSF1 [Zea mays]
           gi|223942169|gb|ACN25168.1| unknown [Zea mays]
           gi|414584737|tpg|DAA35308.1| TPA: DNA replication
           complex GINS protein PSF1 [Zea mays]
          Length = 197

 Score =  162 bits (409), Expect = 3e-38
 Identities = 80/135 (59%), Positives = 97/135 (71%)
 Frame = -2

Query: 408 DLFAQVIEECDGHLLQLQALLRKMQEEGSGNQTTKNADHFGALIHHLSLVRNKRCLMAYV 229
           D+F QVI EC+ H  Q Q+L+RKM E+    +TT+N DH+GA IHHLSL+RNKRCLMAY+
Sbjct: 27  DVFDQVIRECNEHNSQFQSLIRKMVEQNLDIETTRNEDHYGAAIHHLSLLRNKRCLMAYM 86

Query: 228 HNRAEVIQSLGWTIERVLPXXXXXXXXXXXXXXXXKHSATLKSYMSDLDIDLAVDMVPPK 49
           +NRAEVIQS  W I  VLP                 HSA +KSY+S++DIDL VDMVPPK
Sbjct: 87  YNRAEVIQSFRWKIGPVLPHDIQEKLHFSEKEYFKNHSAAIKSYISEMDIDLTVDMVPPK 146

Query: 48  DPYIKVRVLEEIGNV 4
           DPYI+VRVLE+IG V
Sbjct: 147 DPYIQVRVLEDIGEV 161


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