BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038925
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   135   1e-29
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi...   112   6e-23
ref|XP_002517120.1| pentatricopeptide repeat-containing protein,...   106   4e-21
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   102   1e-19
ref|NP_193218.1| pentatricopeptide repeat-containing protein [Ar...    75   1e-11

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score =  135 bits (339), Expect = 1e-29
 Identities = 69/104 (66%), Positives = 81/104 (77%)
 Frame = +3

Query: 420 HLKQIHTQILRSGLDRSNSLLIKLVLSACTLSSPSFDYALSVFYQMHNPEPHLSNKLLRE 599
           HLKQ+H QILRS LDRS SLL+KLV+S+C LSS S DYALSVF  +  PE HL N+ LRE
Sbjct: 38  HLKQVHAQILRSKLDRSTSLLVKLVISSCALSS-SLDYALSVFNLIPKPETHLCNRFLRE 96

Query: 600 LSRSSKPEKALLAYAKMREQGFVIDSFSFPPLLKASTRVLALIE 731
           LSRS +PEK LL Y +MR QG  +D FSFPPLLKA +RV +L+E
Sbjct: 97  LSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVE 140


>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  112 bits (281), Expect = 6e-23
 Identities = 59/105 (56%), Positives = 71/105 (67%), Gaps = 3/105 (2%)
 Frame = +3

Query: 420 HLKQIHTQILRSGLDRSNSLLIKLVLSACTLSSPS---FDYALSVFYQMHNPEPHLSNKL 590
           H+KQIH QILRS +D SN LL+KLVL  CTL SPS    DYALS+F  + NP    SN+L
Sbjct: 27  HVKQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSHIPNPPTRFSNQL 86

Query: 591 LRELSRSSKPEKALLAYAKMREQGFVIDSFSFPPLLKASTRVLAL 725
           LR+ SR   PE  L  Y  +R  GF +D FSFPPLLKA +++ AL
Sbjct: 87  LRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSAL 131


>ref|XP_002517120.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543755|gb|EEF45283.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 477

 Score =  106 bits (265), Expect = 4e-21
 Identities = 59/103 (57%), Positives = 75/103 (72%), Gaps = 1/103 (0%)
 Frame = +3

Query: 420 HLKQIHTQILRSGLDRSNSLLIKLVLSACTLSSPSFDYALSVFYQMHNPEPHLSNKLLRE 599
           +LKQ+H QILRS L  S S+++KL+LS+ + S  S +YALSVF  +  P P LSNKLLR 
Sbjct: 40  YLKQVHAQILRSNL--SPSIILKLILSSSSSSISSLNYALSVFTHIPTPHPTLSNKLLRA 97

Query: 600 LSRSSKPEKALLAYAKMREQG-FVIDSFSFPPLLKASTRVLAL 725
           LSRSSKPE  LL Y K+RE G F +D FSFP +LKA+ ++ AL
Sbjct: 98  LSRSSKPETVLLVYQKIREDGLFGLDKFSFPFILKAAAKIAAL 140


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512069|gb|AES93692.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  102 bits (253), Expect = 1e-19
 Identities = 60/106 (56%), Positives = 70/106 (66%), Gaps = 5/106 (4%)
 Frame = +3

Query: 420 HLKQIHTQILRSGL--DRSNSLLIKLVLSACTLSSPS--FDYALSVFYQMHNPEPHLSNK 587
           HLKQIH QIL S    + +N+LL KL LS CTLSS S    YALSVF Q+ NP  H SN+
Sbjct: 31  HLKQIHAQILHSNTTPENTNTLLSKLALSICTLSSSSSSLHYALSVFSQIPNPHTHFSNQ 90

Query: 588 LLRELSRSSKPEKALLAYAKMRE-QGFVIDSFSFPPLLKASTRVLA 722
           LLR LSRSS PEK +  Y  +R    F +D FSFP LLKA ++V A
Sbjct: 91  LLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSA 136


>ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274931|sp|O23337.1|PP311_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14820 gi|2244839|emb|CAB10261.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|7268228|emb|CAB78524.1| hypothetical protein
           [Arabidopsis thaliana] gi|332658106|gb|AEE83506.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 722

 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 46/106 (43%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
 Frame = +3

Query: 420 HLKQIHTQILRSGLDRS-NSLLIKLVLSACTLSSPSFDYALSVFYQMHNP-EPHLSNKLL 593
           H+KQ+H  ILR+ ++   NS L  L +S+   SS +  YAL+VF  + +P E  + N  L
Sbjct: 27  HIKQLHAHILRTVINHKLNSFLFNLSVSS---SSINLSYALNVFSSIPSPPESIVFNPFL 83

Query: 594 RELSRSSKPEKALLAYAKMREQGFVIDSFSFPPLLKASTRVLALIE 731
           R+LSRSS+P   +L Y ++R  G  +D FSF P+LKA ++V AL E
Sbjct: 84  RDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE 129