BLASTX nr result

ID: Atractylodes21_contig00038880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038880
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2...   235   3e-60
emb|CBI33742.3| unnamed protein product [Vitis vinifera]              233   9e-60
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   233   9e-60
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   233   9e-60
ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containi...   233   2e-59

>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  235 bits (599), Expect = 3e-60
 Identities = 106/156 (67%), Positives = 130/156 (83%)
 Frame = +3

Query: 3   SVGKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEAYGFVKNMKVDPDPIIWGTLLD 182
           S G   F SMK ++ +EP +EHYGCMVNLLGRAGYLEEAY  VKNM++D DP++WGTLL 
Sbjct: 190 SEGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLG 249

Query: 183 ACSLHGNVCLAEEIVKFLVDHNLANSGTYVLLSNLYAVTSNWAGVARMRTMMKDHGVQKE 362
           AC LHGN+ L E+I ++LV  NLANSGTYVLLSN+YA   NW GVAR+RT+MK+ G +KE
Sbjct: 250 ACRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKE 309

Query: 363 PGCSSIEVHNRVHEFVAGDMKHPNSKEIYMMLEEMN 470
           PGCSSIEV+N+VHEF+AGD++HP S+EIY MLEE+N
Sbjct: 310 PGCSSIEVNNKVHEFLAGDLRHPKSREIYEMLEEIN 345


>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  233 bits (595), Expect = 9e-60
 Identities = 106/154 (68%), Positives = 128/154 (83%)
 Frame = +3

Query: 9   GKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEAYGFVKNMKVDPDPIIWGTLLDAC 188
           G  IF  MK ++ +EP IEHYGCMVNLLGRAG++E+AY  VKNM ++PDP++WGTLL AC
Sbjct: 310 GWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGAC 369

Query: 189 SLHGNVCLAEEIVKFLVDHNLANSGTYVLLSNLYAVTSNWAGVARMRTMMKDHGVQKEPG 368
            LHG + L E+IV+ LVD NLANSGTY+LLSN+YA   NW GVAR+RTMMKD GV+KEPG
Sbjct: 370 RLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPG 429

Query: 369 CSSIEVHNRVHEFVAGDMKHPNSKEIYMMLEEMN 470
           CSSIEV+N+VHEF+AG + HP  KEIYMMLEE+N
Sbjct: 430 CSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEIN 463


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  233 bits (595), Expect = 9e-60
 Identities = 106/154 (68%), Positives = 128/154 (83%)
 Frame = +3

Query: 9   GKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEAYGFVKNMKVDPDPIIWGTLLDAC 188
           G  IF  MK ++ +EP IEHYGCMVNLLGRAG++E+AY  VKNM ++PDP++WGTLL AC
Sbjct: 376 GWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGAC 435

Query: 189 SLHGNVCLAEEIVKFLVDHNLANSGTYVLLSNLYAVTSNWAGVARMRTMMKDHGVQKEPG 368
            LHG + L E+IV+ LVD NLANSGTY+LLSN+YA   NW GVAR+RTMMKD GV+KEPG
Sbjct: 436 RLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPG 495

Query: 369 CSSIEVHNRVHEFVAGDMKHPNSKEIYMMLEEMN 470
           CSSIEV+N+VHEF+AG + HP  KEIYMMLEE+N
Sbjct: 496 CSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEIN 529


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  233 bits (595), Expect = 9e-60
 Identities = 106/154 (68%), Positives = 128/154 (83%)
 Frame = +3

Query: 9   GKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEAYGFVKNMKVDPDPIIWGTLLDAC 188
           G  IF  MK ++ +EP IEHYGCMVNLLGRAG++E+AY  VKNM ++PDP++WGTLL AC
Sbjct: 323 GWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGAC 382

Query: 189 SLHGNVCLAEEIVKFLVDHNLANSGTYVLLSNLYAVTSNWAGVARMRTMMKDHGVQKEPG 368
            LHG + L E+IV+ LVD NLANSGTY+LLSN+YA   NW GVAR+RTMMKD GV+KEPG
Sbjct: 383 RLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPG 442

Query: 369 CSSIEVHNRVHEFVAGDMKHPNSKEIYMMLEEMN 470
           CSSIEV+N+VHEF+AG + HP  KEIYMMLEE+N
Sbjct: 443 CSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEIN 476


>ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
           gi|449513125|ref|XP_004164238.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  233 bits (593), Expect = 2e-59
 Identities = 107/154 (69%), Positives = 126/154 (81%)
 Frame = +3

Query: 9   GKGIFVSMKSKHRMEPTIEHYGCMVNLLGRAGYLEEAYGFVKNMKVDPDPIIWGTLLDAC 188
           G+  F  M+ K+ +EP IEHYGCMVNLLGRAG+LEEAYG VKNM +  DP++WGTLL  C
Sbjct: 393 GRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCC 452

Query: 189 SLHGNVCLAEEIVKFLVDHNLANSGTYVLLSNLYAVTSNWAGVARMRTMMKDHGVQKEPG 368
            LH N+ L EEI KFLVD  LANSGTYVLLSN+YA T NW GVA+MRT+MK+HG++KE G
Sbjct: 453 RLHVNIKLGEEIAKFLVDQKLANSGTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHG 512

Query: 369 CSSIEVHNRVHEFVAGDMKHPNSKEIYMMLEEMN 470
           CSSIEV N+VHEFVAG+ KHP SKEIY+ML E+N
Sbjct: 513 CSSIEVDNKVHEFVAGERKHPKSKEIYVMLNEIN 546


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