BLASTX nr result

ID: Atractylodes21_contig00038809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038809
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]   172   3e-41
gb|AFW86910.1| putative cytochrome C oxidase subunit II family p...   105   6e-21
tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II fa...    96   4e-18
ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulg...    60   4e-17
gb|AFW86920.1| putative cytochrome C oxidase subunit II family p...    47   7e-09

>emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]
          Length = 201

 Score =  172 bits (437), Expect = 3e-41
 Identities = 92/143 (64%), Positives = 94/143 (65%)
 Frame = +2

Query: 71  MVREASGLPVISHSRRRET*ITIACQKRGVEMVRPIPRNAPSIEAYGSIXXXXXXXXXXX 250
           MVREASGLPVISHSRRRET ITIACQKRGVE+VRPIPRNAPSI AYGSI           
Sbjct: 1   MVREASGLPVISHSRRRETLITIACQKRGVEVVRPIPRNAPSIGAYGSI----------- 49

Query: 251 GVERYTRNRCSA*NVR*RR*SSESIGTIAVAYNFGPNGRPSNLSEWGIPVGNNHGSSCGT 430
                                   +    VAYNFGPNGRPSNLSEWGIPVGNNHGSSCGT
Sbjct: 50  ------------------------LVVAGVAYNFGPNGRPSNLSEWGIPVGNNHGSSCGT 85

Query: 431 TGPGEDNXXXXXXXXRFGDGGPT 499
           TGPGEDN        RFGDGGPT
Sbjct: 86  TGPGEDNLLFLLLFLRFGDGGPT 108


>gb|AFW86910.1| putative cytochrome C oxidase subunit II family protein [Zea mays]
          Length = 70

 Score =  105 bits (262), Expect = 6e-21
 Identities = 55/70 (78%), Positives = 56/70 (80%)
 Frame = +3

Query: 291 MSDNGAEVVNLSAP*LWHTTLDLTAGPVTFRNGGSPLATTTVVVAELLGRERXXXXXXXX 470
           MSDNGA VVNLSAP  WHTTLDL AGPVTFRNGGSPLATTTVVVAELLG+ER        
Sbjct: 1   MSDNGASVVNLSAPQQWHTTLDLRAGPVTFRNGGSPLATTTVVVAELLGQERTTCCSCSS 60

Query: 471 XXASGTEVLR 500
             ASGTEVLR
Sbjct: 61  FFASGTEVLR 70


>tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
           mays]
          Length = 510

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 45/60 (75%), Positives = 45/60 (75%)
 Frame = +2

Query: 329 TIAVAYNFGPNGRPSNLSEWGIPVGNNHGSSCGTTGPGEDNXXXXXXXXRFGDGGPTVGN 508
           T AVAYNFGP GRP  LSEWGIPVGNNHGSSCGTTGP EDN        RFGDGG TV N
Sbjct: 357 TGAVAYNFGPKGRPRYLSEWGIPVGNNHGSSCGTTGPREDNLLFLLLLLRFGDGGHTVSN 416


>ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulgaris subsp. maritima]
           gi|346683133|ref|YP_004842062.1| hypothetical protein
           BemaM_p014 [Beta macrocarpa]
           gi|317905693|emb|CBX33235.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439773|emb|CBX33287.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148025|emb|CBJ20690.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500051|emb|CBX24867.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939217|emb|CBL52063.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 178

 Score = 60.5 bits (145), Expect(2) = 4e-17
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = +1

Query: 67  EYGSRSIWLTGNLPFPPSRDLNNYSMPETGS 159
           EY S+SIWLTGNLPFP SRD +NYSMPETGS
Sbjct: 148 EYSSQSIWLTGNLPFPSSRDFSNYSMPETGS 178



 Score = 53.1 bits (126), Expect(2) = 4e-17
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +2

Query: 2   GHQWYRSAPLHEGDLSATKCLK 67
           GHQWYRSAPLHEGDLSATKCLK
Sbjct: 125 GHQWYRSAPLHEGDLSATKCLK 146


>gb|AFW86920.1| putative cytochrome C oxidase subunit II family protein [Zea mays]
          Length = 375

 Score = 47.0 bits (110), Expect(2) = 7e-09
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = +2

Query: 2   GHQWYRSAPLHEGDLSATKC 61
           GHQWYRSAPL+EGDLSATKC
Sbjct: 336 GHQWYRSAPLNEGDLSATKC 355



 Score = 38.5 bits (88), Expect(2) = 7e-09
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +1

Query: 73  GSRSIWLTGNLPFPPSRD 126
           GSRSIWLTG+LPFP SRD
Sbjct: 358 GSRSIWLTGHLPFPSSRD 375


Top