BLASTX nr result

ID: Atractylodes21_contig00038791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038791
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]   127   1e-27
ref|XP_002319373.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002517971.1| pentatricopeptide repeat-containing protein,...   118   4e-25
ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containi...   114   1e-23

>ref|XP_002272784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like
            [Vitis vinifera]
          Length = 1008

 Score =  127 bits (319), Expect = 1e-27
 Identities = 64/96 (66%), Positives = 72/96 (75%)
 Frame = +3

Query: 3    LPTAGTFKVLFTVLKKGGIPTEGVEQLEFAYQEGKLYARQAVVTAVFTVVGLHTYASEFL 182
            LP  GTFKV+FTVLKKGG+PTE V QLE +YQEGK YARQAV+T+VF+ VGLH +A E  
Sbjct: 830  LPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESC 889

Query: 183  ETSIQFEAGLDLFAYNVAIYVYGALGRIDDAFKMFM 290
            ET +  E  LD   YNVAIY YGA G ID A KMFM
Sbjct: 890  ETFLNAEVDLDSSFYNVAIYAYGASGSIDKALKMFM 925


>emb|CAN75708.1| hypothetical protein VITISV_031421 [Vitis vinifera]
          Length = 1313

 Score =  127 bits (319), Expect = 1e-27
 Identities = 64/96 (66%), Positives = 72/96 (75%)
 Frame = +3

Query: 3    LPTAGTFKVLFTVLKKGGIPTEGVEQLEFAYQEGKLYARQAVVTAVFTVVGLHTYASEFL 182
            LP  GTFKV+FTVLKKGG+PTE V QLE +YQEGK YARQAV+T+VF+ VGLH +A E  
Sbjct: 1135 LPDTGTFKVMFTVLKKGGLPTEAVTQLESSYQEGKPYARQAVITSVFSTVGLHAFALESC 1194

Query: 183  ETSIQFEAGLDLFAYNVAIYVYGALGRIDDAFKMFM 290
            ET +  E  LD   YNVAIY YGA G ID A KMFM
Sbjct: 1195 ETFLNAEVDLDSSFYNVAIYAYGASGSIDKALKMFM 1230


>ref|XP_002319373.1| predicted protein [Populus trichocarpa] gi|222857749|gb|EEE95296.1|
           predicted protein [Populus trichocarpa]
          Length = 810

 Score =  125 bits (315), Expect = 3e-27
 Identities = 62/96 (64%), Positives = 72/96 (75%)
 Frame = +3

Query: 3   LPTAGTFKVLFTVLKKGGIPTEGVEQLEFAYQEGKLYARQAVVTAVFTVVGLHTYASEFL 182
           LP  GTFK+LFTVLKKGG P+EG+ QLE AY EGK YARQAV+T++F+VVGLH  A E  
Sbjct: 618 LPDGGTFKILFTVLKKGGFPSEGIAQLESAYLEGKPYARQAVITSIFSVVGLHALALESC 677

Query: 183 ETSIQFEAGLDLFAYNVAIYVYGALGRIDDAFKMFM 290
           E+  + E  LD FAYNVAIY YG+ G ID A K FM
Sbjct: 678 ESFTKAEVALDSFAYNVAIYAYGSSGEIDKALKTFM 713


>ref|XP_002517971.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223542953|gb|EEF44489.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1029

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/95 (61%), Positives = 70/95 (73%)
 Frame = +3

Query: 6    PTAGTFKVLFTVLKKGGIPTEGVEQLEFAYQEGKLYARQAVVTAVFTVVGLHTYASEFLE 185
            P  GTFK+LFTVLKKGG+PTE V QLE +Y EGK YARQAV+T+VF++VGLH  A E  +
Sbjct: 829  PDGGTFKILFTVLKKGGLPTEAVMQLESSYHEGKPYARQAVITSVFSLVGLHALAMESCK 888

Query: 186  TSIQFEAGLDLFAYNVAIYVYGALGRIDDAFKMFM 290
               + +  LDLFAYNVAI+ YG+ G ID A   FM
Sbjct: 889  IFTKADIALDLFAYNVAIFAYGSSGEIDKALNTFM 923


>ref|XP_003532952.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73710-like
            [Glycine max]
          Length = 963

 Score =  114 bits (284), Expect = 1e-23
 Identities = 56/96 (58%), Positives = 70/96 (72%)
 Frame = +3

Query: 3    LPTAGTFKVLFTVLKKGGIPTEGVEQLEFAYQEGKLYARQAVVTAVFTVVGLHTYASEFL 182
            LP  GTFKVLFT+LKKGGIPTE V QLE +YQEGK YARQ   TA++++VG+H  A E  
Sbjct: 757  LPNDGTFKVLFTILKKGGIPTEAVAQLESSYQEGKPYARQTTFTALYSLVGMHNLALESA 816

Query: 183  ETSIQFEAGLDLFAYNVAIYVYGALGRIDDAFKMFM 290
            +T I+ E  LD  A+NVAIY YG+ G I+ A  ++M
Sbjct: 817  QTFIESEVDLDSSAFNVAIYAYGSAGDINKALNIYM 852


Top