BLASTX nr result

ID: Atractylodes21_contig00038781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038781
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]   142   6e-32
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...   141   7e-32
emb|CBI19874.3| unnamed protein product [Vitis vinifera]              141   7e-32
ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c...   129   3e-28
ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25

>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score =  142 bits (357), Expect = 6e-32
 Identities = 85/191 (44%), Positives = 110/191 (57%), Gaps = 9/191 (4%)
 Frame = +2

Query: 2   PPMTPLHEVSQKIPDYVRFGPILPTSAGFSPVLKAKKKAREASSFSAACIASENLEDSAA 181
           PPMTP+HEVS+ IPDYV+FGPILP SAGFS +LKAK  AREA   +    +S+NLE+S  
Sbjct: 270 PPMTPMHEVSRSIPDYVKFGPILPKSAGFSLILKAKDNAREACRLNVTSKSSQNLEESVM 329

Query: 182 WDIQEGI-------PXXXXXXXXXXXXXRVHNIESLPTVKMSKDYKTGPNGHILKEKNQP 340
           WD+QE                       + + + S  ++KM+   + GP     K ++Q 
Sbjct: 330 WDLQEETIEENEDNSDYEPDSAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQL 389

Query: 341 LSPQMFSPVISPKTSTKVLSSKQDGNDK--VMSTLTIRATRAMDYKVATSLPTSPPVYHD 514
            S   FS   SPKTS K+ S K D +      S L + ++RAMD  V+TSLP SP +Y D
Sbjct: 390 PSSTSFSSTDSPKTSLKISSPKSDSHXHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKD 449

Query: 515 LSISSADSDNE 547
            SISSADSD E
Sbjct: 450 SSISSADSDGE 460


>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
           vinifera]
          Length = 1494

 Score =  141 bits (356), Expect = 7e-32
 Identities = 85/191 (44%), Positives = 110/191 (57%), Gaps = 9/191 (4%)
 Frame = +2

Query: 2   PPMTPLHEVSQKIPDYVRFGPILPTSAGFSPVLKAKKKAREASSFSAACIASENLEDSAA 181
           PPMTP+HEVS+ IPDYV+FGPILP SAGFS +LKAK  AREA   +    +S+NLE+S  
Sbjct: 270 PPMTPMHEVSRSIPDYVKFGPILPKSAGFSLILKAKDNAREACRLNVTSKSSQNLEESVM 329

Query: 182 WDIQEGI-------PXXXXXXXXXXXXXRVHNIESLPTVKMSKDYKTGPNGHILKEKNQP 340
           WD+QE                       + + + S  ++KM+   + GP     K ++Q 
Sbjct: 330 WDLQEETIEENEDNSDYEPDSAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQL 389

Query: 341 LSPQMFSPVISPKTSTKVLSSKQDG--NDKVMSTLTIRATRAMDYKVATSLPTSPPVYHD 514
            S   FS   SPKTS K+ S K D   +    S L + ++RAMD  V+TSLP SP +Y D
Sbjct: 390 PSSTSFSSTDSPKTSLKISSPKSDSHCHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKD 449

Query: 515 LSISSADSDNE 547
            SISSADSD E
Sbjct: 450 SSISSADSDGE 460


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score =  141 bits (356), Expect = 7e-32
 Identities = 85/191 (44%), Positives = 110/191 (57%), Gaps = 9/191 (4%)
 Frame = +2

Query: 2   PPMTPLHEVSQKIPDYVRFGPILPTSAGFSPVLKAKKKAREASSFSAACIASENLEDSAA 181
           PPMTP+HEVS+ IPDYV+FGPILP SAGFS +LKAK  AREA   +    +S+NLE+S  
Sbjct: 286 PPMTPMHEVSRSIPDYVKFGPILPKSAGFSLILKAKDNAREACRLNVTSKSSQNLEESVM 345

Query: 182 WDIQEGI-------PXXXXXXXXXXXXXRVHNIESLPTVKMSKDYKTGPNGHILKEKNQP 340
           WD+QE                       + + + S  ++KM+   + GP     K ++Q 
Sbjct: 346 WDLQEETIEENEDNSDYEPDSAYMDSEDKTYQVVSHSSMKMNIYKEMGPKVQPPKIRSQL 405

Query: 341 LSPQMFSPVISPKTSTKVLSSKQDG--NDKVMSTLTIRATRAMDYKVATSLPTSPPVYHD 514
            S   FS   SPKTS K+ S K D   +    S L + ++RAMD  V+TSLP SP +Y D
Sbjct: 406 PSSTSFSSTDSPKTSLKISSPKSDSHCHKGPTSVLRLLSSRAMDSTVSTSLPVSPRLYKD 465

Query: 515 LSISSADSDNE 547
            SISSADSD E
Sbjct: 466 SSISSADSDGE 476


>ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis]
           gi|223551243|gb|EEF52729.1| hypothetical protein
           RCOM_1598060 [Ricinus communis]
          Length = 1427

 Score =  129 bits (325), Expect = 3e-28
 Identities = 81/192 (42%), Positives = 108/192 (56%), Gaps = 10/192 (5%)
 Frame = +2

Query: 2   PPMTPLHEVSQKIPDYVRFGPILPTSAGFSPVLKAKKKAREASSFSAACIASENLEDSAA 181
           PPMTPLHEVS+ IPDYV+FGPILP SAGFSPV+++K  AREA   SA+   S NLE+S  
Sbjct: 270 PPMTPLHEVSRSIPDYVKFGPILPKSAGFSPVVRSKYGAREAGRLSASPSLSHNLEESTV 329

Query: 182 WDIQEGI-----PXXXXXXXXXXXXXRVHNIESLPTVKMSKDYKTG---PNGHILKEKNQ 337
           WD QE I                   + H + +L + KM +  + G   P+    K  ++
Sbjct: 330 WDTQESILNENEDHSDPDNGNLDSEDKSHKLVTLRSTKMIEIKEMGTIKPS----KSSSR 385

Query: 338 PLSPQMFSPVISPKTSTKVLSSKQDGNDKVMSTLTIR--ATRAMDYKVATSLPTSPPVYH 511
             SP +FS + SP T    +S+  D + K  ST   R  +++ MD   A SLP SP + +
Sbjct: 386 SHSPTIFSSMDSPSTFWPKVSANSDAHSKTESTSLSRHLSSQVMDSTNAPSLPVSPSIIN 445

Query: 512 DLSISSADSDNE 547
           D SISS DSD +
Sbjct: 446 DYSISSRDSDGQ 457


>ref|XP_002300701.1| predicted protein [Populus trichocarpa] gi|222842427|gb|EEE79974.1|
           predicted protein [Populus trichocarpa]
          Length = 1518

 Score =  120 bits (300), Expect = 2e-25
 Identities = 75/193 (38%), Positives = 106/193 (54%), Gaps = 11/193 (5%)
 Frame = +2

Query: 2   PPMTPLHEVSQKIPDYVRFGPILPTSAGFSPVLKAKKKAREASSFSAACIASENLEDSAA 181
           PP+TPLHEVS+ IPDYV+FGPILP SAGFSPVL+ K  A+  S        S NLE+S+A
Sbjct: 259 PPVTPLHEVSRSIPDYVKFGPILPHSAGFSPVLRFKHAAKAESRLGIISSLSPNLEESSA 318

Query: 182 W---------DIQEGIPXXXXXXXXXXXXXRVHNIESLPTVKMSKDYKTGPNGHILKEKN 334
                     + +E                + H + +LP++K +++   G +    K K+
Sbjct: 319 TCDPPPEGKPEDRENDSDCEPSDTYFDSEDKNHKLTTLPSIKSTENKDIGVSKRPSKAKS 378

Query: 335 QPLSPQMFSPVISPKTSTKVLS--SKQDGNDKVMSTLTIRATRAMDYKVATSLPTSPPVY 508
           Q  SP++ SP+ SP+ S K++S  S      +  + L I + RAMD  +ATSLP SP + 
Sbjct: 379 QKHSPKICSPMDSPRISPKIISPNSVVQSKREPKTILRILSCRAMDSAIATSLPDSPCMS 438

Query: 509 HDLSISSADSDNE 547
            +   SS DSD E
Sbjct: 439 KEHGSSSPDSDGE 451


Top