BLASTX nr result

ID: Atractylodes21_contig00038768 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038768
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    79   3e-13
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    72   6e-11
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    65   7e-09
ref|XP_002532644.1| conserved hypothetical protein [Ricinus comm...    57   1e-06
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    55   5e-06

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/67 (55%), Positives = 50/67 (74%)
 Frame = +3

Query: 3   TLVLRRFRSTQSGSLHEQWLSITQTESVADYQRRFIEFAAPLVDISEETALGQYIHGLKN 182
           + VL +FR    GSLHEQWLS TQT SV +Y+R+F+E AAPL  I EE  +G++IHGL  
Sbjct: 241 SFVLTQFRPLNVGSLHEQWLSTTQTASVWEYRRKFVETAAPLDGIPEEILMGKFIHGLNP 300

Query: 183 EIRAEVR 203
           E+++E+R
Sbjct: 301 ELQSEIR 307


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/66 (54%), Positives = 44/66 (66%)
 Frame = +3

Query: 6   LVLRRFRSTQSGSLHEQWLSITQTESVADYQRRFIEFAAPLVDISEETALGQYIHGLKNE 185
           ++LRRFR T  GSL EQWLS  Q E V +Y+R+FIE  APL  I E  A  Q++  LK E
Sbjct: 167 MLLRRFRETALGSLQEQWLSHEQEEGVVEYRRKFIELLAPLEGIPESIAQAQFVSKLKEE 226

Query: 186 IRAEVR 203
           I+ EVR
Sbjct: 227 IKNEVR 232


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/66 (50%), Positives = 44/66 (66%)
 Frame = +3

Query: 6   LVLRRFRSTQSGSLHEQWLSITQTESVADYQRRFIEFAAPLVDISEETALGQYIHGLKNE 185
           ++LR+FR T  GSL EQW++  Q  SV +Y+ RFIE  APL +I E  A  Q+I  LK E
Sbjct: 147 MLLRQFRDTALGSLQEQWMNHHQEGSVKEYKSRFIELMAPLDNIPENIAQAQFISKLKEE 206

Query: 186 IRAEVR 203
           I+ E+R
Sbjct: 207 IKNEMR 212


>ref|XP_002532644.1| conserved hypothetical protein [Ricinus communis]
           gi|223527635|gb|EEF29747.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 462

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/61 (40%), Positives = 45/61 (73%)
 Frame = +3

Query: 21  FRSTQSGSLHEQWLSITQTESVADYQRRFIEFAAPLVDISEETALGQYIHGLKNEIRAEV 200
           FRSTQ G+LH+Q L++ QT +V +++R+F   AAPL  ++E+     +++GL+ +++AE+
Sbjct: 178 FRSTQEGTLHDQLLALKQTTTVKEFRRQFEIIAAPLKGLAEDVLEAAFVNGLRPDMQAEL 237

Query: 201 R 203
           R
Sbjct: 238 R 238


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/65 (49%), Positives = 40/65 (61%)
 Frame = +3

Query: 9    VLRRFRSTQSGSLHEQWLSITQTESVADYQRRFIEFAAPLVDISEETALGQYIHGLKNEI 188
            +L RFR TQ GSL EQ+L++ Q  +VA Y R F     PL  ISEE     +++GL  EI
Sbjct: 839  LLLRFRLTQEGSLCEQFLAVRQQGTVAAYWREFEILETPLKGISEEVMESTFMNGLLPEI 898

Query: 189  RAEVR 203
            RAE R
Sbjct: 899  RAEQR 903


Top