BLASTX nr result

ID: Atractylodes21_contig00038700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038700
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248...   100   3e-19
ref|XP_003523814.1| PREDICTED: uncharacterized protein LOC100780...    92   1e-16
emb|CBI19167.3| unnamed protein product [Vitis vinifera]               86   5e-15
ref|XP_002302301.1| methyl binding domain protein [Populus trich...    86   8e-15
ref|XP_004152635.1| PREDICTED: methyl-CpG-binding domain-contain...    77   3e-12

>ref|XP_002284140.2| PREDICTED: uncharacterized protein LOC100248904 [Vitis vinifera]
          Length = 947

 Score =  100 bits (248), Expect = 3e-19
 Identities = 63/166 (37%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
 Frame = -2

Query: 564 LRIDSIPVVDLRLFSQAELYAXXXXXXXSFDLNRCDDVVIPKINRSVFNESTGSRRQTYS 385
           L ++++P++DLR  SQ+EL A       S DL RCDDVVIPKI+RS+FNES GSR+QTYS
Sbjct: 12  LHLEALPLIDLRFLSQSELQALSLTSSHSSDLRRCDDVVIPKIDRSIFNESAGSRKQTYS 71

Query: 384 RLRLASAEXXXXXXXXXXXXXXXXXXXXXTPSSNNINDPEQAENSQIIRMLKHLCKSDPN 205
           RLRLA  +                       +     +P   EN+ II +LK L  ++ +
Sbjct: 72  RLRLAPRKPDIAATIPRRPRFSPHL------NQKAALEPVDEENTLIIGLLKGLFATETH 125

Query: 204 FEDVV-----QNEDENNINSVVPEFLSPDALGIKRKRGRPRKHENV 82
            +D++       E  N I   +P  +  D+ G KRKRGRP+  + +
Sbjct: 126 ADDLIPVQVEYRESSNEILQNIPIDVVADS-GRKRKRGRPKSEKTI 170


>ref|XP_003523814.1| PREDICTED: uncharacterized protein LOC100780637 [Glycine max]
          Length = 877

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 69/195 (35%), Positives = 91/195 (46%), Gaps = 19/195 (9%)
 Frame = -2

Query: 561 RIDSIPVVDLRLFSQAELYAXXXXXXXSFDL-NRCDDVVIPKINRSVFNESTGSRRQTYS 385
           R+DS+P+VDLRL SQ ELY             N  DD VIPKI+RS FNES GSR+QTYS
Sbjct: 15  RVDSLPLVDLRLLSQPELYTLSLSGATHCHRRNSDDDSVIPKIDRSNFNESAGSRKQTYS 74

Query: 384 RLRLASAEXXXXXXXXXXXXXXXXXXXXXTPSSNNINDPEQAENSQIIRMLKHLCKSDPN 205
           +LRL   +                          +I++PE+ ENS+I+ +L+ L   +P 
Sbjct: 75  KLRLNKRKQNPAVPASSSFHIPL-----------HISEPEEEENSRIVALLQQLFGVEPL 123

Query: 204 FEDVVQNEDENNINSVVPEFLSP----------------DALGIKRKRGRPRKHEN--VV 79
                 +  E  +  V  +F  P                D+   KRKRGRPRK EN   V
Sbjct: 124 RNAPRNDAAERRLVPVQVDFKQPPPMFAAFQNVPIDVVADSSQRKRKRGRPRKDENSVTV 183

Query: 78  FIRPPTAKRIRNNTV 34
           F+  P       N+V
Sbjct: 184 FVEEPKKVTKEENSV 198


>emb|CBI19167.3| unnamed protein product [Vitis vinifera]
          Length = 1129

 Score = 86.3 bits (212), Expect = 5e-15
 Identities = 50/125 (40%), Positives = 71/125 (56%)
 Frame = -2

Query: 564 LRIDSIPVVDLRLFSQAELYAXXXXXXXSFDLNRCDDVVIPKINRSVFNESTGSRRQTYS 385
           L ++++P++DLR  SQ+EL A       S DL RCDDVVIPKI+RS+FNES GSR+QTYS
Sbjct: 14  LHLEALPLIDLRFLSQSELQALSLTSSHSSDLRRCDDVVIPKIDRSIFNESAGSRKQTYS 73

Query: 384 RLRLASAEXXXXXXXXXXXXXXXXXXXXXTPSSNNINDPEQAENSQIIRMLKHLCKSDPN 205
           RLRLA  +                       +     +P   EN+ II +LK L  ++ +
Sbjct: 74  RLRLAPRKPDIAATIPRRPRFSPHL------NQKAALEPVDEENTLIIGLLKGLFATETH 127

Query: 204 FEDVV 190
            +D++
Sbjct: 128 ADDLI 132


>ref|XP_002302301.1| methyl binding domain protein [Populus trichocarpa]
           gi|222844027|gb|EEE81574.1| methyl binding domain
           protein [Populus trichocarpa]
          Length = 1276

 Score = 85.5 bits (210), Expect = 8e-15
 Identities = 77/226 (34%), Positives = 98/226 (43%), Gaps = 41/226 (18%)
 Frame = -2

Query: 564 LRIDSIPVVDLRLFSQAELYAXXXXXXXSFDLNRCD--DVVIPKINRSVFNESTGSRRQT 391
           L I+S+P++DLR  SQ+EL +          L R D  DV  PKI+RSVFNES GSR+QT
Sbjct: 17  LHIESLPLIDLRHLSQSELLSLSFCSSSPHRL-RTDTADVSTPKIDRSVFNESAGSRKQT 75

Query: 390 YSRLRLASAEXXXXXXXXXXXXXXXXXXXXXTPSSNNINDPEQAENSQIIRMLKHLCKSD 211
           +SRLRLA                         P  N    P   ENSQII +LK L  SD
Sbjct: 76  FSRLRLAPRN---------NNASPSSNSTPVVPFQNTERQPLDEENSQIISLLKSLFGSD 126

Query: 210 PN------------------FEDVVQNEDENNINS------------------VVPEFLS 139
            N                  + D ++    NN  S                   V   +S
Sbjct: 127 SNSIENKNEHYHKLVSIPVIYNDYMRLPSTNNAESQNVSIDIWDSSQGGLKRLEVNHSIS 186

Query: 138 ---PDALGIKRKRGRPRKHENVVFIRPPTAKRIRNNTVKKVVVYDN 10
               ++   KRKRGRPRK+ENV F     ++ + N T+   VV DN
Sbjct: 187 IRTAESSSKKRKRGRPRKNENVNFDNNDNSELVENKTI--AVVCDN 230


>ref|XP_004152635.1| PREDICTED: methyl-CpG-binding domain-containing protein 8-like
           isoform 2 [Cucumis sativus]
           gi|449503925|ref|XP_004162229.1| PREDICTED:
           methyl-CpG-binding domain-containing protein 8-like
           isoform 2 [Cucumis sativus]
          Length = 222

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 29/188 (15%)
 Frame = -2

Query: 561 RIDSIPVVDLRLFSQAEL-----YAXXXXXXXSFDLNRCDDVVIPKINRSVFNESTGSRR 397
           R++ +P++DLRL SQ+EL     ++       +   N  DDV+IPKI+RSVFNES GSR+
Sbjct: 16  RMNPLPIIDLRLLSQSELHCLSRFSSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRK 75

Query: 396 QTYSRLRLASAEXXXXXXXXXXXXXXXXXXXXXTPSSNNIN----DPEQAENSQIIRMLK 229
           QTYSRLRLA  +                     + SS+ I     D    E++QI+ +  
Sbjct: 76  QTYSRLRLAPRK----------------PQFSSSSSSSTIRPQSPDRLDTESAQIVHLFN 119

Query: 228 HLCKSDPN--------------------FEDVVQNEDENNINSVVPEFLSPDALGIKRKR 109
            L   D +                    +++ V +       S+  + +    + IKR+R
Sbjct: 120 QLFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRR 179

Query: 108 GRPRKHEN 85
           GRPRK  N
Sbjct: 180 GRPRKDSN 187


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