BLASTX nr result

ID: Atractylodes21_contig00038689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038689
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30590.3| unnamed protein product [Vitis vinifera]              130   5e-28
ref|XP_003593614.1| Dof zinc finger protein [Medicago truncatula...   125   2e-26
ref|XP_002329827.1| f-box family protein [Populus trichocarpa] g...   123   8e-26
ref|XP_004134698.1| PREDICTED: dof zinc finger protein DOF3.6-li...   122   2e-25
ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-li...   121   2e-25

>emb|CBI30590.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score =  130 bits (327), Expect = 5e-28
 Identities = 101/254 (39%), Positives = 122/254 (48%), Gaps = 47/254 (18%)
 Frame = +3

Query: 3   YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKISPXXXXXXXXXXXHVA 182
           YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK                 
Sbjct: 124 YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPASSVDAPSSAPTAAL 183

Query: 183 STSQPVDHNPNPNLDHLSSLYGLAPQNPN-----YQRFNT------LVSGYDFSQPQVSD 329
           +   P   + + + +H++ L+   P NP+     + RFN+       VSGYD  QPQ+  
Sbjct: 184 NPPPPSQIDLSASSNHVTPLFYGLPSNPSELNLPFPRFNSRASNEDTVSGYDL-QPQLGA 242

Query: 330 AGLGFSS---------SDPGAGF---------------LSSYPXXXXXXXXXXXXXXXXX 437
            GLGFSS          D   GF               LS+Y                  
Sbjct: 243 LGLGFSSGIIANDTRTDDYRNGFNPAKQIQDLVTSSSLLSNY--SIFGSSSSTTTPTMAS 300

Query: 438 XXXGFQQQQRF-------SDWSNHFHGQNNN----DQLQAMTSSDPSSLLWN-TPTGGWF 581
                 QQQ+F       S  +NHF    N+    +Q++ + SSDP SL WN T  G W 
Sbjct: 301 LINSSLQQQKFMNGDLKESRGANHFQPLWNSVPCQNQIEQIGSSDP-SLYWNLTSLGAWS 359

Query: 582 DPTSNIDSSVPSLI 623
           D   N+ SSV SLI
Sbjct: 360 D-LPNMGSSVTSLI 372


>ref|XP_003593614.1| Dof zinc finger protein [Medicago truncatula]
           gi|355482662|gb|AES63865.1| Dof zinc finger protein
           [Medicago truncatula]
          Length = 309

 Score =  125 bits (314), Expect = 2e-26
 Identities = 93/252 (36%), Positives = 114/252 (45%), Gaps = 45/252 (17%)
 Frame = +3

Query: 3   YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKISPXXXXXXXXXXXHVA 182
           YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGG R+N   K S              +
Sbjct: 59  YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGYRRNNSNKRSNNTTLIKIPSTIDTS 118

Query: 183 STSQPVDHNPNPN-------LDHLSS--LYGLAPQNP-----NYQRFN----TLVSGYDF 308
            +S P   +  PN       L+H  S   YGL+  N       + RFN    +  SGYDF
Sbjct: 119 ISSSPSTPSSTPNTTSSNSTLNHNISPMFYGLSSSNSCDVNLPFSRFNISRLSTSSGYDF 178

Query: 309 SQPQVSDAGLGFSS------SDPGAGFLSSYPXXXXXXXXXXXXXXXXXXXXGFQQQQRF 470
            QPQ++  GLGFSS      ++   G+ + +                        Q +  
Sbjct: 179 -QPQMNTIGLGFSSGFTSSEANDHNGYTNGFTSRYGSIFSSSSVPSNASVMPSLLQHKFI 237

Query: 471 SDWSNHFHGQNNN-----------------DQLQAMTSSDPSSLLWNTPT----GGWFDP 587
           +D SN F G   N                 + +  +     SSL WNT +    G W D 
Sbjct: 238 NDGSNSFQGLEFNNLGNGSEKGTKKDEGEMEHVGGLYDPAASSLYWNTASSSAIGVWNDQ 297

Query: 588 TSNIDSSVPSLI 623
            SNI SSV SLI
Sbjct: 298 ASNIGSSVTSLI 309


>ref|XP_002329827.1| f-box family protein [Populus trichocarpa]
           gi|222870889|gb|EEF08020.1| f-box family protein
           [Populus trichocarpa]
          Length = 322

 Score =  123 bits (308), Expect = 8e-26
 Identities = 69/134 (51%), Positives = 80/134 (59%), Gaps = 18/134 (13%)
 Frame = +3

Query: 3   YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKISPXXXXXXXXXXXHVA 182
           YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK              +  
Sbjct: 43  YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK----RPASAAEGASNSV 98

Query: 183 STSQPVDHNPNPNLDHLSS--------LYGLAPQNPNYQ----------RFNTLVSGYDF 308
           S++ P   NP   +DH+SS         YGL+  NP+            R ++ VSGY  
Sbjct: 99  SSANP---NPQTPIDHISSTSNHINPLFYGLSGSNPSEMNLPFPGRFNPRMDSAVSGYHD 155

Query: 309 SQPQVSDAGLGFSS 350
            QPQ++   LGFSS
Sbjct: 156 LQPQLNALALGFSS 169


>ref|XP_004134698.1| PREDICTED: dof zinc finger protein DOF3.6-like [Cucumis sativus]
           gi|449479286|ref|XP_004155559.1| PREDICTED: dof zinc
           finger protein DOF3.6-like [Cucumis sativus]
          Length = 251

 Score =  122 bits (305), Expect = 2e-25
 Identities = 93/247 (37%), Positives = 104/247 (42%), Gaps = 41/247 (16%)
 Frame = +3

Query: 3   YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKISPXXXXXXXXXXXHVA 182
           YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKR+K S              A
Sbjct: 38  YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRLKTSSSSSTSVN------A 91

Query: 183 STSQPVDHNPNPNLDHLSSLYGLAPQNPNYQRFNTLVSGYDFSQPQV--SDAGLGFSSSD 356
           +++ P   NP   L H        P   +    N   S   F    +     GLG SSS 
Sbjct: 92  NSTSPPSQNPR-LLIHNPINSTTVPNIVSSSALNHTNSSMFFGLDSIGGGSGGLGLSSS- 149

Query: 357 PGAGFLSSYPXXXXXXXXXXXXXXXXXXXXGFQQQQRFSDWSNHFHG------------- 497
              G LS +                         QQ FS  SNHFH              
Sbjct: 150 ---GLLSHF---------------------NDPHQQPFS--SNHFHHPTISFDRNSHLLG 183

Query: 498 ----------------------QNNNDQLQAMTSSDPSSLLWN----TPTGGWFDPTSNI 599
                                 QN  +Q+     SDPSS+ WN    T TG W DPT+  
Sbjct: 184 NIDPNLMTSMKEIKIEDLNRLCQNQTEQIDLSNFSDPSSIYWNSGTTTVTGNWHDPTNYN 243

Query: 600 DSSVPSL 620
            SSV SL
Sbjct: 244 GSSVASL 250


>ref|XP_003633022.1| PREDICTED: dof zinc finger protein DOF1.4-like [Vitis vinifera]
          Length = 309

 Score =  121 bits (304), Expect = 2e-25
 Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 11/127 (8%)
 Frame = +3

Query: 3   YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKISPXXXXXXXXXXXHVA 182
           YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK                 
Sbjct: 32  YYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPASSVDAPSSAPTAAL 91

Query: 183 STSQPVDHNPNPNLDHLSSLYGLAPQNPN-----YQRFNT------LVSGYDFSQPQVSD 329
           +   P   + + + +H++ L+   P NP+     + RFN+       VSGYD  QPQ+  
Sbjct: 92  NPPPPSQIDLSASSNHVTPLFYGLPSNPSELNLPFPRFNSRASNEDTVSGYDL-QPQLGA 150

Query: 330 AGLGFSS 350
            GLGFSS
Sbjct: 151 LGLGFSS 157


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