BLASTX nr result

ID: Atractylodes21_contig00038686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038686
         (617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin...   268   7e-70
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ...   264   8e-69
ref|XP_002300018.1| predicted protein [Populus trichocarpa] gi|2...   244   7e-63
ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containin...   239   3e-61
ref|XP_004158351.1| PREDICTED: zinc finger CCCH domain-containin...   238   6e-61

>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Vitis vinifera]
          Length = 948

 Score =  268 bits (684), Expect = 7e-70
 Identities = 124/205 (60%), Positives = 158/205 (77%)
 Frame = +2

Query: 2   HRRREDARSQSLEDDAMEKVFTKPYRRGSKPFQNGHFYGETGSQSNETWRKYSFNPLEKD 181
           HRRRE  RSQSLE D++E+V ++PYR+ +KPF+NGH + E  SQS+ +W+ Y+ +P+EKD
Sbjct: 39  HRRRE-TRSQSLERDSLEQVLSRPYRKRNKPFENGHSFRENDSQSSGSWKNYNISPMEKD 97

Query: 182 ISAKFDQKRTEFTQFSRGPSDLNQKIKVNQPFSSDPGAVWGRGRDSGLWNQRDPRFSSID 361
            S KF+++R     F+R P DLNQ+ ++NQ FS D G V GRGRD G WNQRDPRFS +D
Sbjct: 98  FSGKFEKRRPGLATFARAPLDLNQRTRMNQSFSGDSGPVRGRGRDPGSWNQRDPRFSQVD 157

Query: 362 LASQIVQQGSVPHSLFAGRGLPTASNSRGPSWSAFGLVPGMPNGGLDMLHPLGLQGTFRP 541
           +ASQ+V QGS+P  L+AGRGLP  SN++  SWS FGL+PG+PNG LD LH LGLQGT RP
Sbjct: 158 IASQMV-QGSIPPGLYAGRGLPNVSNTQNASWSGFGLLPGIPNGALDSLHSLGLQGTLRP 216

Query: 542 ATNPSLNMGLPRQRCRDFEEQGFCL 616
             + SLN  +PRQRCRDFEE+GFCL
Sbjct: 217 PLSTSLNKSIPRQRCRDFEERGFCL 241


>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
           gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
           [Ricinus communis]
          Length = 972

 Score =  264 bits (675), Expect = 8e-69
 Identities = 126/205 (61%), Positives = 156/205 (76%)
 Frame = +2

Query: 2   HRRREDARSQSLEDDAMEKVFTKPYRRGSKPFQNGHFYGETGSQSNETWRKYSFNPLEKD 181
           HRRRE  RSQS E D++E +FT+ YR+ +KPF+NGH + E  SQ +ETW+  +  PLEKD
Sbjct: 39  HRRRE-TRSQSTERDSLEPIFTRSYRKRNKPFENGHPFRENESQGSETWKNSNIAPLEKD 97

Query: 182 ISAKFDQKRTEFTQFSRGPSDLNQKIKVNQPFSSDPGAVWGRGRDSGLWNQRDPRFSSID 361
              KFD++R     F R   DLNQ+I+ NQ F  +PG   GRGRDSG WNQRD RFSS+D
Sbjct: 98  F-IKFDKRRPGMASFPRMNVDLNQRIRSNQIFFGEPGPGRGRGRDSGSWNQRDSRFSSVD 156

Query: 362 LASQIVQQGSVPHSLFAGRGLPTASNSRGPSWSAFGLVPGMPNGGLDMLHPLGLQGTFRP 541
           +ASQ+VQQGS+   LFAGRGLP  SN++  SW+ FGL+PG+P+GGLD LHP+GLQGT RP
Sbjct: 157 IASQMVQQGSITPGLFAGRGLPNVSNTQNSSWNTFGLIPGIPSGGLDTLHPIGLQGTLRP 216

Query: 542 ATNPSLNMGLPRQRCRDFEEQGFCL 616
           A N SLN+G+PRQRCRDFEE+GFCL
Sbjct: 217 AVNSSLNIGIPRQRCRDFEERGFCL 241


>ref|XP_002300018.1| predicted protein [Populus trichocarpa] gi|222847276|gb|EEE84823.1|
           predicted protein [Populus trichocarpa]
          Length = 981

 Score =  244 bits (624), Expect = 7e-63
 Identities = 120/205 (58%), Positives = 149/205 (72%)
 Frame = +2

Query: 2   HRRREDARSQSLEDDAMEKVFTKPYRRGSKPFQNGHFYGETGSQSNETWRKYSFNPLEKD 181
           HRRRE  RSQSLE D++E V T+PYR+ +K F+NGH + E  SQ+ ETW+ Y+   LEKD
Sbjct: 39  HRRRE-TRSQSLERDSLEPVSTRPYRKHNKHFENGHPFRENESQARETWKNYNSVSLEKD 97

Query: 182 ISAKFDQKRTEFTQFSRGPSDLNQKIKVNQPFSSDPGAVWGRGRDSGLWNQRDPRFSSID 361
            + KF++ R +     R P DLNQ+I++NQ FS DPG   GRGR+ G W+QRD RFSS+ 
Sbjct: 98  YATKFERIRPDLMSLPRMPVDLNQRIRLNQTFSGDPGPSRGRGREYGSWSQRDSRFSSVG 157

Query: 362 LASQIVQQGSVPHSLFAGRGLPTASNSRGPSWSAFGLVPGMPNGGLDMLHPLGLQGTFRP 541
           +ASQ+   G    SLFAGRGL   SN +  SW+AFGL+P M NGGLD +HP+GLQGT RP
Sbjct: 158 IASQMAHLGP---SLFAGRGLANVSNVQSASWNAFGLMPRMSNGGLDTIHPIGLQGTLRP 214

Query: 542 ATNPSLNMGLPRQRCRDFEEQGFCL 616
           A N SLNMG+P QRCRDFEE+GFCL
Sbjct: 215 AVNSSLNMGIPHQRCRDFEERGFCL 239


>ref|XP_003554702.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Glycine max]
          Length = 945

 Score =  239 bits (610), Expect = 3e-61
 Identities = 113/205 (55%), Positives = 149/205 (72%)
 Frame = +2

Query: 2   HRRREDARSQSLEDDAMEKVFTKPYRRGSKPFQNGHFYGETGSQSNETWRKYSFNPLEKD 181
           HRRRE ARSQSLE D  + V ++P+++ +K F N H + E  SQ+ ET + YS    +K+
Sbjct: 39  HRRRE-ARSQSLERDVSDPVISRPFKKRNKNFGNRHPFRENESQAFETLKTYSDATTDKE 97

Query: 182 ISAKFDQKRTEFTQFSRGPSDLNQKIKVNQPFSSDPGAVWGRGRDSGLWNQRDPRFSSID 361
              KFD++R       R P D++Q+++ NQ F+ DPG   GRGR+SG WNQR+ RF S+D
Sbjct: 98  FYFKFDRRRPGLASAPRAPLDMSQRLRANQSFTGDPGIGRGRGRESGFWNQRESRFGSMD 157

Query: 362 LASQIVQQGSVPHSLFAGRGLPTASNSRGPSWSAFGLVPGMPNGGLDMLHPLGLQGTFRP 541
           +ASQ+V QGS+P SL+AGRGL   SN++  SW+ FGL+P +PNGGLDMLHP+GLQGT RP
Sbjct: 158 VASQVVPQGSIPPSLYAGRGLLNVSNAQNASWNTFGLIPAVPNGGLDMLHPMGLQGTLRP 217

Query: 542 ATNPSLNMGLPRQRCRDFEEQGFCL 616
             N SLN+ +PRQRCRDFEE+GFCL
Sbjct: 218 PINSSLNVNIPRQRCRDFEERGFCL 242


>ref|XP_004158351.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Cucumis sativus]
          Length = 800

 Score =  238 bits (607), Expect = 6e-61
 Identities = 117/205 (57%), Positives = 145/205 (70%)
 Frame = +2

Query: 2   HRRREDARSQSLEDDAMEKVFTKPYRRGSKPFQNGHFYGETGSQSNETWRKYSFNPLEKD 181
           HRRRE  RSQSLE DA E V  +PY + SKPF+NG  + +  SQ+NE W+ ++   LEKD
Sbjct: 37  HRRRE-TRSQSLERDAREHVL-RPYGKRSKPFENGRSFRDNDSQANEAWKSFNAPTLEKD 94

Query: 182 ISAKFDQKRTEFTQFSRGPSDLNQKIKVNQPFSSDPGAVWGRGRDSGLWNQRDPRFSSID 361
              KFD++R       R   D NQ+I+ NQ FS D  +  GRGRDSG WNQ D RFS +D
Sbjct: 95  TPGKFDKRRLGAVPGPRVVGDFNQRIRGNQAFSGDLSSGRGRGRDSGTWNQFDSRFSPVD 154

Query: 362 LASQIVQQGSVPHSLFAGRGLPTASNSRGPSWSAFGLVPGMPNGGLDMLHPLGLQGTFRP 541
           +ASQIV  GS P SLFAGRGLP+ S ++   W+AFGL+ G+PN GL+ +HP+GLQGT RP
Sbjct: 155 IASQIVHHGSFPPSLFAGRGLPSVSTAQTAPWNAFGLISGIPNSGLETMHPIGLQGTLRP 214

Query: 542 ATNPSLNMGLPRQRCRDFEEQGFCL 616
             NP LN+G+PRQRCRDFEE+GFCL
Sbjct: 215 PINPPLNIGIPRQRCRDFEERGFCL 239


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