BLASTX nr result

ID: Atractylodes21_contig00038661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038661
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   128   6e-28
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   127   1e-27
gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. ...   121   7e-26
emb|CAJ65868.1| putative integrase [Cucumis melo]                     120   1e-25
emb|CAJ65867.1| putative integrase [Cucumis melo]                     120   2e-25

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  128 bits (321), Expect = 6e-28
 Identities = 60/99 (60%), Positives = 81/99 (81%)
 Frame = -2

Query: 297  HQICRVCQQQEHSTRYPVDLL*PLSLPAQVWDELTMDFIEGLHRSQGMDIVLVVVDWLIK 118
            HQ C +CQQQ+ S ++P  LL PL +P+ VW++++MDFIEGL  S+G+D +LV+VD L K
Sbjct: 1213 HQ-CLICQQQKVSQQHPRGLLQPLPIPSLVWEDISMDFIEGLPVSKGVDTILVIVDRLSK 1271

Query: 117  YAHFLSLKHPFTATKVASLFVREIGRLHGFPASIISDKD 1
            YAHFL+L+HPFTA  VA LFV+E+ RLHGFP+SI+SD+D
Sbjct: 1272 YAHFLTLRHPFTALMVADLFVKEVVRLHGFPSSIVSDRD 1310


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  127 bits (318), Expect = 1e-27
 Identities = 56/98 (57%), Positives = 79/98 (80%)
 Frame = -2

Query: 294  QICRVCQQQEHSTRYPVDLL*PLSLPAQVWDELTMDFIEGLHRSQGMDIVLVVVDWLIKY 115
            Q C++CQQ + ST  P  LL PL +P  +W++++MDF+EGL +SQG D +LVVVD L KY
Sbjct: 1146 QNCQICQQFKTSTLSPAGLLQPLPIPLAIWEDISMDFVEGLPKSQGWDTILVVVDRLSKY 1205

Query: 114  AHFLSLKHPFTATKVASLFVREIGRLHGFPASIISDKD 1
            AHF++LKHPFTA  VA++F++EI +LHGFP++I+SD+D
Sbjct: 1206 AHFITLKHPFTAPTVAAVFIKEIVKLHGFPSTIVSDRD 1243


>gb|ACP30609.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2726

 Score =  121 bits (303), Expect = 7e-26
 Identities = 53/96 (55%), Positives = 75/96 (78%)
 Frame = -2

Query: 288  CRVCQQQEHSTRYPVDLL*PLSLPAQVWDELTMDFIEGLHRSQGMDIVLVVVDWLIKYAH 109
            C +CQ  ++ST  P  LL PL +P ++W++++MDF+EGL  SQG+++++VVVD L KYAH
Sbjct: 2316 CNICQTHKYSTLAPAGLLQPLPIPNRIWEDVSMDFVEGLPGSQGVNVIMVVVDRLSKYAH 2375

Query: 108  FLSLKHPFTATKVASLFVREIGRLHGFPASIISDKD 1
            F+ LKHPFTA +VAS FV E+ + HGFP SI+SD+D
Sbjct: 2376 FVGLKHPFTAVEVASKFVSEVVKHHGFPRSIVSDRD 2411


>emb|CAJ65868.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  120 bits (301), Expect = 1e-25
 Identities = 54/96 (56%), Positives = 74/96 (77%)
 Frame = -2

Query: 288 CRVCQQQEHSTRYPVDLL*PLSLPAQVWDELTMDFIEGLHRSQGMDIVLVVVDWLIKYAH 109
           C VCQQ +     P  LL PLS+P ++W++++MDF+EGL RS+G D +LVVVD L KYAH
Sbjct: 13  CHVCQQNKIQALSPAGLLQPLSIPNRIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAH 72

Query: 108 FLSLKHPFTATKVASLFVREIGRLHGFPASIISDKD 1
           F++L HPF+A  VA +FV+E+ RLHG+P SI+SD+D
Sbjct: 73  FITLGHPFSAKVVALVFVKEVVRLHGYPRSIVSDRD 108


>emb|CAJ65867.1| putative integrase [Cucumis melo]
          Length = 134

 Score =  120 bits (300), Expect = 2e-25
 Identities = 54/96 (56%), Positives = 74/96 (77%)
 Frame = -2

Query: 288 CRVCQQQEHSTRYPVDLL*PLSLPAQVWDELTMDFIEGLHRSQGMDIVLVVVDWLIKYAH 109
           C VCQQ +     P  LL PLS+P ++W++++MDF+EGL RS+G D +LVVVD L KYAH
Sbjct: 13  CHVCQQTKIQALSPAGLLHPLSIPNRIWEDISMDFVEGLPRSKGFDTILVVVDRLSKYAH 72

Query: 108 FLSLKHPFTATKVASLFVREIGRLHGFPASIISDKD 1
           F++L HPF+A  VA +FV+E+ RLHG+P SI+SD+D
Sbjct: 73  FITLGHPFSAKVVALVFVKEVVRLHGYPRSIVSDRD 108


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