BLASTX nr result

ID: Atractylodes21_contig00038521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038521
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]               96   3e-18
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi...    92   6e-17
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]      83   2e-14
gb|ABA93844.2| retrotransposon protein, putative, unclassified [...    82   5e-14
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...    81   8e-14

>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/99 (45%), Positives = 63/99 (63%)
 Frame = -2

Query: 300 ISFLSNDQLISCNKDSRLTVCHACQLG*HCWLPFSPSINKTYAPFDILHTDL*TSPIVNL 121
           +S L +   ISCNKD    +CHACQLG H  LPFS S ++    FD++H DL  SPIV++
Sbjct: 607 LSQLVSSSAISCNKDDDYHLCHACQLGRHTRLPFSTSTSRATNNFDLIHCDLWASPIVSV 666

Query: 120 MGIRYYLLLLDDYTNFI*VLPLKQNSQVFETFRNFHTYI 4
            G +YYL++LDD +++I   PL+  S  F T  NF  ++
Sbjct: 667 SGYKYYLIILDDRSHYIWTFPLRLKSDTFSTVANFFAHV 705


>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
          Length = 964

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 39/82 (47%), Positives = 56/82 (68%)
 Frame = -2

Query: 249 LTVCHACQLG*HCWLPFSPSINKTYAPFDILHTDL*TSPIVNLMGIRYYLLLLDDYTNFI 70
           L+VCHACQLG HC LPF+ S  +  + FD++H DL TSP+ ++ G +YYL++LDD ++F+
Sbjct: 725 LSVCHACQLGRHCRLPFNTSFTRATSNFDLIHCDLWTSPVSSVSGYKYYLVILDDCSHFV 784

Query: 69  *VLPLKQNSQVFETFRNFHTYI 4
              PL+  S  F T  NF  Y+
Sbjct: 785 WTFPLRLKSDTFRTLTNFFAYV 806


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 37/91 (40%), Positives = 59/91 (64%)
 Frame = -2

Query: 276 LISCNKDSRLTVCHACQLG*HCWLPFSPSINKTYAPFDILHTDL*TSPIVNLMGIRYYLL 97
           ++SC + +   +CHAC LG H  L FS S + T +PF+++H D+ TSP+++L G +YYL+
Sbjct: 510 ILSCTRSNN-KLCHACHLGKHTRLSFSKSSSSTSSPFELVHCDVWTSPVLSLSGFKYYLV 568

Query: 96  LLDDYTNFI*VLPLKQNSQVFETFRNFHTYI 4
           +LDD+T+F    PL+  S V +    F  Y+
Sbjct: 569 VLDDFTHFCWTFPLRHKSDVHQHLLEFVAYV 599


>gb|ABA93844.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1099

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 34/80 (42%), Positives = 55/80 (68%)
 Frame = -2

Query: 243 VCHACQLG*HCWLPFSPSINKTYAPFDILHTDL*TSPIVNLMGIRYYLLLLDDYTNFI*V 64
           VCHA QLG H  LPF+ S  +  A F+++H DL TSP+ ++ G +YYL++LDDY++++  
Sbjct: 528 VCHAYQLGRHVRLPFTSSFTRASAKFELVHCDLWTSPVPSVYGFKYYLVILDDYSHYVWT 587

Query: 63  LPLKQNSQVFETFRNFHTYI 4
            PL+  S+ F+T  +F  ++
Sbjct: 588 FPLRLKSETFDTISHFFAFV 607


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1679

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 35/80 (43%), Positives = 52/80 (65%)
 Frame = -2

Query: 243 VCHACQLG*HCWLPFSPSINKTYAPFDILHTDL*TSPIVNLMGIRYYLLLLDDYTNFI*V 64
           VCHACQLG H  LPF+ S ++    F++ H DL TSP+V+  G +YYL++LDD ++++  
Sbjct: 727 VCHACQLGRHVRLPFASSTSRASTNFELFHCDLWTSPVVSASGFKYYLVILDDCSHYVWT 786

Query: 63  LPLKQNSQVFETFRNFHTYI 4
            PL+  S  F T  +F  Y+
Sbjct: 787 FPLRFKSDTFTTLSHFFAYV 806


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