BLASTX nr result

ID: Atractylodes21_contig00038507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038507
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003636545.1| Pentatricopeptide repeat-containing protein ...    65   6e-09
gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK...    65   6e-09
ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232...    61   1e-07
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    61   1e-07
ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812...    60   1e-07

>ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355502480|gb|AES83683.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/92 (40%), Positives = 51/92 (55%)
 Frame = -3

Query: 312  EMPSDSREKRVGECAIFEFQGAIVDPDLGPKTLKLKGSLMGIPVCFLVDSGATHNFVSQN 133
            E+  +  E+   EC +    G++ + +    T+K+ G L  I V  LVDSGATHNF+S  
Sbjct: 984  EVLEEEEEEIESECKVIGVLGSMGEYN----TMKIGGKLENIDVVVLVDSGATHNFISAK 1039

Query: 132  LAVALSLPVEQFSGLQIKLGDGHTVLVTQRCK 37
            L  AL L +   +  +IKLGDGH VL    CK
Sbjct: 1040 LTSALGLTITPMAARKIKLGDGHEVLSQGVCK 1071


>gb|ACJ85145.1| unknown [Medicago truncatula] gi|388517775|gb|AFK46949.1| unknown
           [Medicago truncatula]
          Length = 185

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/92 (40%), Positives = 51/92 (55%)
 Frame = -3

Query: 312 EMPSDSREKRVGECAIFEFQGAIVDPDLGPKTLKLKGSLMGIPVCFLVDSGATHNFVSQN 133
           E+  +  E+   EC +    G++ + +    T+K+ G L  I V  LVDSGATHNF+S  
Sbjct: 53  EVLEEEEEEIESECKVIGVLGSMGEYN----TMKIGGKLENIDVVVLVDSGATHNFISAK 108

Query: 132 LAVALSLPVEQFSGLQIKLGDGHTVLVTQRCK 37
           L  AL L +   +  +IKLGDGH VL    CK
Sbjct: 109 LTSALGLTITPMAARKIKLGDGHEVLSQGVCK 140


>ref|XP_004161777.1| PREDICTED: uncharacterized protein LOC101232599 [Cucumis sativus]
          Length = 446

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/71 (39%), Positives = 43/71 (60%)
 Frame = -3

Query: 225 PKTLKLKGSLMGIPVCFLVDSGATHNFVSQNLAVALSLPVEQFSGLQIKLGDGHTVLVTQ 46
           P T+K++G++    V  LVD GATHNF+S  L + L LP +  S   + LG G T+   +
Sbjct: 362 PGTMKIRGTIQSKEVVVLVDCGATHNFISDRLVMTLKLPSKDTSNYGVILGSGTTIKGKR 421

Query: 45  RCKNLSIELNG 13
            C+ + ++LNG
Sbjct: 422 VCEKVELDLNG 432


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/71 (40%), Positives = 42/71 (59%)
 Frame = -3

Query: 225 PKTLKLKGSLMGIPVCFLVDSGATHNFVSQNLAVALSLPVEQFSGLQIKLGDGHTVLVTQ 46
           PKTLKL+G++ G  V  ++D GATHNFVS +    L++PV    G ++ LG G  V  T 
Sbjct: 375 PKTLKLRGTIYGEAVIVMIDPGATHNFVSIHTVERLNIPVSHAKGFEVSLGTGQEVRGTG 434

Query: 45  RCKNLSIELNG 13
            C  + + + G
Sbjct: 435 ECLAVPLMVQG 445


>ref|XP_003533374.1| PREDICTED: uncharacterized protein LOC100812827 [Glycine max]
          Length = 572

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/96 (30%), Positives = 54/96 (56%)
 Frame = -3

Query: 300 DSREKRVGECAIFEFQGAIVDPDLGPKTLKLKGSLMGIPVCFLVDSGATHNFVSQNLAVA 121
           +S E+   EC +    G++ +      T++++G +  + +  L+DSGA+HNF+S  +  A
Sbjct: 377 ESEEEVEVECKLMGVLGSMGESH----TMRVEGKIHNVDLLVLIDSGASHNFISPKVTTA 432

Query: 120 LSLPVEQFSGLQIKLGDGHTVLVTQRCKNLSIELNG 13
           L L +       IKLGDGH ++    CK +++++ G
Sbjct: 433 LGLVITPTVAKSIKLGDGHRLITNGVCKGVNMQMGG 468


Top