BLASTX nr result

ID: Atractylodes21_contig00038135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00038135
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|2...    99   3e-19
ref|XP_002315995.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002267498.2| PREDICTED: putative U-box domain-containing ...    95   5e-18
emb|CBI27413.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002888693.1| hypothetical protein ARALYDRAFT_339138 [Arab...    78   8e-13

>ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|222851239|gb|EEE88786.1|
           predicted protein [Populus trichocarpa]
          Length = 949

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/113 (40%), Positives = 67/113 (59%)
 Frame = +1

Query: 1   IICPQTGRKITSRVLNRNIVLMETIKQWEERNEQXXXXXXXXXXXXXXXXXXXXEALHNL 180
           I CP TG+K+ SRVL  N+ L  TI++W+ERNE                     EA+ +L
Sbjct: 203 IFCPTTGQKLLSRVLKTNVALKTTIEEWKERNEVARINISRSALFVSASPSMVLEAIRDL 262

Query: 181 QSLCKKSQYNVVEIRTIGVIPLLGTILAQKDRDVTFETLELLRQLAENDDDDE 339
           Q +CK+ QYN +++   G++PLL  +L  KDRDV +  LELL++L + DDD +
Sbjct: 263 QDICKRKQYNKIQVHNAGILPLLCKLLKYKDRDVRYAALELLQELTKEDDDSK 315


>ref|XP_002315995.1| predicted protein [Populus trichocarpa] gi|222865035|gb|EEF02166.1|
           predicted protein [Populus trichocarpa]
          Length = 935

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/110 (40%), Positives = 66/110 (60%)
 Frame = +1

Query: 1   IICPQTGRKITSRVLNRNIVLMETIKQWEERNEQXXXXXXXXXXXXXXXXXXXXEALHNL 180
           I CP TG+K+ SRVL  N+ L  TI++W+ERNE                     EA+ +L
Sbjct: 191 IFCPITGKKLLSRVLRTNVALKTTIEEWKERNEVARIKCSRSALVLSASPSMVLEAIRDL 250

Query: 181 QSLCKKSQYNVVEIRTIGVIPLLGTILAQKDRDVTFETLELLRQLAENDD 330
           Q +CK+ Q+N +++   G++PLL  +L  +DRDV +E LELLR+L + DD
Sbjct: 251 QEICKRKQHNKIQVHNAGILPLLFKLLEYRDRDVIYEALELLRELTKEDD 300


>ref|XP_002267498.2| PREDICTED: putative U-box domain-containing protein 42-like [Vitis
           vinifera]
          Length = 1055

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/115 (44%), Positives = 69/115 (60%)
 Frame = +1

Query: 1   IICPQTGRKITSRVLNRNIVLMETIKQWEERNEQXXXXXXXXXXXXXXXXXXXXEALHNL 180
           I CP TG+K+ S+ L+ NI L  TI++W+ERNE                     EAL++L
Sbjct: 310 ICCPATGQKLRSKGLSTNIALKTTIEEWKERNEAARIKVARAALSLAISESMVLEALNDL 369

Query: 181 QSLCKKSQYNVVEIRTIGVIPLLGTILAQKDRDVTFETLELLRQLAENDDDDEGK 345
           QS+C +  YN V+IR +G++PLL   L  KD +V   TLE+LR+LAE   DDEGK
Sbjct: 370 QSICGRKPYNKVQIRNVGMLPLLVKFLEYKDTNVRLATLEILRELAE---DDEGK 421


>emb|CBI27413.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 51/115 (44%), Positives = 69/115 (60%)
 Frame = +1

Query: 1   IICPQTGRKITSRVLNRNIVLMETIKQWEERNEQXXXXXXXXXXXXXXXXXXXXEALHNL 180
           I CP TG+K+ S+ L+ NI L  TI++W+ERNE                     EAL++L
Sbjct: 250 ICCPATGQKLRSKGLSTNIALKTTIEEWKERNEAARIKVARAALSLAISESMVLEALNDL 309

Query: 181 QSLCKKSQYNVVEIRTIGVIPLLGTILAQKDRDVTFETLELLRQLAENDDDDEGK 345
           QS+C +  YN V+IR +G++PLL   L  KD +V   TLE+LR+LAE   DDEGK
Sbjct: 310 QSICGRKPYNKVQIRNVGMLPLLVKFLEYKDTNVRLATLEILRELAE---DDEGK 361


>ref|XP_002888693.1| hypothetical protein ARALYDRAFT_339138 [Arabidopsis lyrata subsp.
           lyrata] gi|297334534|gb|EFH64952.1| hypothetical protein
           ARALYDRAFT_339138 [Arabidopsis lyrata subsp. lyrata]
          Length = 1032

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 42/112 (37%), Positives = 59/112 (52%)
 Frame = +1

Query: 1   IICPQTGRKITSRVLNRNIVLMETIKQWEERNEQXXXXXXXXXXXXXXXXXXXXEALHNL 180
           I CP TG+K+T+  L+ N+VL   I++W+ RNE                     +A  +L
Sbjct: 288 INCPVTGQKLTTE-LSENVVLKTIIQEWKVRNEAARIKVAHAALSLGGSESMVIDAFRDL 346

Query: 181 QSLCKKSQYNVVEIRTIGVIPLLGTILAQKDRDVTFETLELLRQLAENDDDD 336
           Q  C+  QYN V +R  G+I LL   L  + +DV +E L LLR LA+ D DD
Sbjct: 347 QMTCEGKQYNKVRVREAGIIQLLDRYLTYRSKDVRYELLRLLRTLADEDTDD 398


Top