BLASTX nr result

ID: Atractylodes21_contig00036996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036996
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]   109   3e-22
gb|AFK45606.1| unknown [Lotus japonicus]                              107   1e-21
ref|XP_003536470.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and...   107   1e-21
ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycin...   107   1e-21
ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   106   2e-21

>emb|CAN74801.1| hypothetical protein VITISV_006288 [Vitis vinifera]
          Length = 244

 Score =  109 bits (272), Expect = 3e-22
 Identities = 62/94 (65%), Positives = 70/94 (74%), Gaps = 9/94 (9%)
 Frame = +3

Query: 12  YLRRSEN-----SPANSRERNLLQAKMVTSAVVNTFPLSSYTFGTKEPKMEKDTSVADRL 176
           +L   EN     S ++S E    + +MVTS VVNT+PLSSYTFGTKEPKMEKDTSVADRL
Sbjct: 10  FLSEGENDGGCQSESDSTEEVEARREMVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRL 69

Query: 177 ARMKVNYMKEGMRTSVEGILLVL----PYFSLIQ 266
           ARMKVNYMKEGMRTSVE ILLV     P+  L+Q
Sbjct: 70  ARMKVNYMKEGMRTSVEAILLVQEHNHPHILLLQ 103


>gb|AFK45606.1| unknown [Lotus japonicus]
          Length = 200

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/68 (82%), Positives = 60/68 (88%), Gaps = 4/68 (5%)
 Frame = +3

Query: 75  MVTSAVVNTFPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVL--- 245
           MV+S VVNT+PLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLV    
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 246 -PYFSLIQ 266
            P+  L+Q
Sbjct: 61  HPHILLLQ 68


>ref|XP_003536470.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
           specificity factor subunit 5-like [Glycine max]
          Length = 200

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/68 (82%), Positives = 60/68 (88%), Gaps = 4/68 (5%)
 Frame = +3

Query: 75  MVTSAVVNTFPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVL--- 245
           MV+S VVNT+PLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLV    
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 246 -PYFSLIQ 266
            P+  L+Q
Sbjct: 61  HPHILLLQ 68


>ref|NP_001237041.1| uncharacterized protein LOC100306068 [Glycine max]
           gi|255627433|gb|ACU14061.1| unknown [Glycine max]
          Length = 200

 Score =  107 bits (266), Expect = 1e-21
 Identities = 56/68 (82%), Positives = 60/68 (88%), Gaps = 4/68 (5%)
 Frame = +3

Query: 75  MVTSAVVNTFPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVL--- 245
           MV+S VVNT+PLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLV    
Sbjct: 1   MVSSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 246 -PYFSLIQ 266
            P+  L+Q
Sbjct: 61  HPHILLLQ 68


>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/68 (82%), Positives = 59/68 (86%), Gaps = 4/68 (5%)
 Frame = +3

Query: 75  MVTSAVVNTFPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVL--- 245
           MVTS VVNT+PLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVE ILLV    
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 246 -PYFSLIQ 266
            P+  L+Q
Sbjct: 61  HPHILLLQ 68


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