BLASTX nr result

ID: Atractylodes21_contig00036856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036856
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 i...    82   3e-14
ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 i...    82   3e-14
emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]    82   3e-14
ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-l...    79   5e-13
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...    77   2e-12

>ref|XP_003632354.1| PREDICTED: CUGBP Elav-like family member 5 isoform 2 [Vitis
           vinifera]
          Length = 447

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -1

Query: 423 EKERQARKAQKAQSLASNLANVDPTQHPSLFGALPMGYMSPFNGYGYQ 280
           EKERQARKAQKAQS ASNL + D  QHPSLFGALP+GY+ P+NGYGYQ
Sbjct: 194 EKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQ 241


>ref|XP_002270390.1| PREDICTED: CUGBP Elav-like family member 5 isoform 1 [Vitis
           vinifera] gi|296086641|emb|CBI32276.3| unnamed protein
           product [Vitis vinifera]
          Length = 437

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -1

Query: 423 EKERQARKAQKAQSLASNLANVDPTQHPSLFGALPMGYMSPFNGYGYQ 280
           EKERQARKAQKAQS ASNL + D  QHPSLFGALP+GY+ P+NGYGYQ
Sbjct: 184 EKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQ 231


>emb|CAN71673.1| hypothetical protein VITISV_044358 [Vitis vinifera]
          Length = 450

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/48 (79%), Positives = 42/48 (87%)
 Frame = -1

Query: 423 EKERQARKAQKAQSLASNLANVDPTQHPSLFGALPMGYMSPFNGYGYQ 280
           EKERQARKAQKAQS ASNL + D  QHPSLFGALP+GY+ P+NGYGYQ
Sbjct: 238 EKERQARKAQKAQSQASNLPSADSGQHPSLFGALPLGYVPPYNGYGYQ 285


>ref|XP_004148884.1| PREDICTED: CUGBP Elav-like family member 2-like [Cucumis sativus]
           gi|449491521|ref|XP_004158924.1| PREDICTED: CUGBP
           Elav-like family member 2-like [Cucumis sativus]
          Length = 438

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 43/84 (51%), Positives = 54/84 (64%)
 Frame = -1

Query: 423 EKERQARKAQKAQSLASNLANVDPTQHPSLFGALPMGYMSPFNGYGYQVCFVIVIASLFH 244
           EKERQARKAQKAQS A+N+ N D +QHPSLFGA+P+GY+ P+NGYGYQ            
Sbjct: 191 EKERQARKAQKAQSQATNVLNAD-SQHPSLFGAMPLGYVPPYNGYGYQA----------- 238

Query: 243 CCSMANMFGSIQFLLCIHCNKSGF 172
                  +G +Q+ L    N+SGF
Sbjct: 239 ----PGSYGLMQYHLPPMQNQSGF 258


>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
           gi|223540085|gb|EEF41662.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 436

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 37/48 (77%), Positives = 41/48 (85%)
 Frame = -1

Query: 423 EKERQARKAQKAQSLASNLANVDPTQHPSLFGALPMGYMSPFNGYGYQ 280
           EKERQAR+AQK QS ASNL N D +QHPSLFGALPMGY+  +NGYGYQ
Sbjct: 184 EKERQARRAQKVQSQASNLPNAD-SQHPSLFGALPMGYVPQYNGYGYQ 230