BLASTX nr result

ID: Atractylodes21_contig00036750 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036750
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vit...    91   7e-17
emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]    89   5e-16
ref|XP_002533989.1| ring finger protein, putative [Ricinus commu...    77   1e-12
ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 fing...    75   5e-12
ref|XP_003610233.1| RING finger protein [Medicago truncatula] gi...    73   2e-11

>ref|XP_002269611.1| PREDICTED: RING-H2 finger protein ATL13 [Vitis vinifera]
          Length = 543

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 57/124 (45%), Positives = 71/124 (57%), Gaps = 13/124 (10%)
 Frame = -1

Query: 412 RESFSVSKIWLRGKKDQKPNSTVAAAIXXXXXXXXXXXXPVHRNELKANR------RANS 251
           RESFS+SKIWLRGKK+   + TV ++                 ++LK         R  S
Sbjct: 425 RESFSISKIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAADDLKLKNVSSSTGRTVS 484

Query: 250 DVDIGRWEN-------DQEIQTCQWLDSPLDQASNPPSLARRTLLWLMGRQQIKVVHSSC 92
           +++IGRWEN       D+E+Q+C  LDS     +NPPS ARRTLLWLMGRQ  KVVHSS 
Sbjct: 485 ELEIGRWENGGSELGCDEEMQSCNSLDSQ----ANPPSFARRTLLWLMGRQN-KVVHSSF 539

Query: 91  STNV 80
             NV
Sbjct: 540 PPNV 543


>emb|CAN71824.1| hypothetical protein VITISV_042464 [Vitis vinifera]
          Length = 543

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 56/124 (45%), Positives = 69/124 (55%), Gaps = 13/124 (10%)
 Frame = -1

Query: 412 RESFSVSKIWLRGKKDQKPNSTVAAAIXXXXXXXXXXXXPVHRNELKANR------RANS 251
           RESFS+SKIWLRGKK+   + TV ++                  + K         R  S
Sbjct: 425 RESFSISKIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAAXDXKLKNVSSSTGRTVS 484

Query: 250 DVDIGRWEN-------DQEIQTCQWLDSPLDQASNPPSLARRTLLWLMGRQQIKVVHSSC 92
           +++IGRWEN       D+E+Q+C  LDS     +NPPS ARRTLLWLMGRQ  KVVHSS 
Sbjct: 485 ELEIGRWENGGSELGCDEEMQSCNSLDSQ----ANPPSFARRTLLWLMGRQN-KVVHSSF 539

Query: 91  STNV 80
             NV
Sbjct: 540 PPNV 543


>ref|XP_002533989.1| ring finger protein, putative [Ricinus communis]
           gi|223526024|gb|EEF28396.1| ring finger protein,
           putative [Ricinus communis]
          Length = 495

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 52/124 (41%), Positives = 65/124 (52%), Gaps = 13/124 (10%)
 Frame = -1

Query: 412 RESFSVSKIWLRGKKDQK--PNSTVAAAIXXXXXXXXXXXXPVHRNELKAN-------RR 260
           RESFS+SKIWLRG+K+++  P  +   A                 + LK         RR
Sbjct: 382 RESFSISKIWLRGEKEKQKPPGDSSRRAFSFRFPVNKNVVPGDEDDNLKVKNGNGSGARR 441

Query: 259 ANSDVDIGRWEN----DQEIQTCQWLDSPLDQASNPPSLARRTLLWLMGRQQIKVVHSSC 92
            NS++ IGRWEN    D+E Q C          +  PS ARRTLLWL+GRQ  KVVHSS 
Sbjct: 442 TNSEIGIGRWENRFSFDEENQICN---------AKTPSFARRTLLWLVGRQN-KVVHSSF 491

Query: 91  STNV 80
           + NV
Sbjct: 492 TPNV 495


>ref|XP_003542294.1| PREDICTED: LOW QUALITY PROTEIN: RING-H2 finger protein ATL13-like,
           partial [Glycine max]
          Length = 524

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 21/127 (16%)
 Frame = -1

Query: 412 RESFSVSKIWLRGKKDQKPNS-------------TVAAAIXXXXXXXXXXXXPVHRNELK 272
           +ESFS+SKIWLRGKKD KPN+              V +++               +N   
Sbjct: 399 KESFSISKIWLRGKKD-KPNAGADSSRRAVSFRFPVKSSVVAAASGSADDDDLKGKNCKF 457

Query: 271 ANRRANSDVDIGRWEN--------DQEIQTCQWLDSPLDQASNPPSLARRTLLWLMGRQQ 116
             R   S++DIG+WEN        D+E Q+C  +DS   +A   PS ARRTLLWL G +Q
Sbjct: 458 DTRSTMSEMDIGKWENGRGTEFDYDEENQSCYSMDSSQARA---PSFARRTLLWLTGGRQ 514

Query: 115 IKVVHSS 95
            KVVHS+
Sbjct: 515 NKVVHSA 521


>ref|XP_003610233.1| RING finger protein [Medicago truncatula]
           gi|355511288|gb|AES92430.1| RING finger protein
           [Medicago truncatula]
          Length = 511

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 48/127 (37%), Positives = 65/127 (51%), Gaps = 16/127 (12%)
 Frame = -1

Query: 412 RESFSVSKIWLRGKKDQK-------PNSTVAAAIXXXXXXXXXXXXPVHRNELKANRRAN 254
           +ESFS+SKIWLRGKKD+K           V+                  +N +   R   
Sbjct: 390 KESFSISKIWLRGKKDKKNGDVTDSSRRAVSFRFPLQSNVGSGNDDLKGKNGMFHTRSTV 449

Query: 253 SDVDIGRWEN---------DQEIQTCQWLDSPLDQASNPPSLARRTLLWLMGRQQIKVVH 101
           S++D G+WEN         D+E Q+C  +DS     +  PS ARRTLLWL G+Q  KVVH
Sbjct: 450 SEMDFGKWENGGGSEFSGYDEENQSCYSMDS----QARAPSFARRTLLWLTGKQN-KVVH 504

Query: 100 SSCSTNV 80
           SS ++ +
Sbjct: 505 SSTTSTL 511


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