BLASTX nr result

ID: Atractylodes21_contig00036737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036737
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containi...    99   4e-19
ref|XP_002302359.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_002527349.1| pentatricopeptide repeat-containing protein,...    97   2e-18
emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]    97   2e-18

>ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 49/82 (59%), Positives = 57/82 (69%)
 Frame = +3

Query: 3   PNVLTYNAVMVGLCKARKTDRAIDFLGYMVTKGCKPTEGTYMILIXXXXXXXXXXXXXXX 182
           PN +TYN++M+GLCKAR+T RAIDFL YMV +GCKPTE +YMILI               
Sbjct: 525 PNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALEL 584

Query: 183 XXXXCSRGVVKKRSAEQVVVKL 248
               CSRGVVKK SAEQVVVK+
Sbjct: 585 LNELCSRGVVKKSSAEQVVVKI 606


>ref|XP_002302359.1| predicted protein [Populus trichocarpa] gi|222844085|gb|EEE81632.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 48/82 (58%), Positives = 56/82 (68%)
 Frame = +3

Query: 3   PNVLTYNAVMVGLCKARKTDRAIDFLGYMVTKGCKPTEGTYMILIXXXXXXXXXXXXXXX 182
           PN  TYN++M GLCKA++TDRAIDFL YM++KGCKPTE +Y ILI               
Sbjct: 294 PNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALEL 353

Query: 183 XXXXCSRGVVKKRSAEQVVVKL 248
               CSRGVVKK SAEQVVV+L
Sbjct: 354 LNELCSRGVVKKSSAEQVVVRL 375


>ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/82 (56%), Positives = 56/82 (68%)
 Frame = +3

Query: 3   PNVLTYNAVMVGLCKARKTDRAIDFLGYMVTKGCKPTEGTYMILIXXXXXXXXXXXXXXX 182
           PN +TYN++M+GLCK+R+TDRAIDFL YM++K CKPTE TY ILI               
Sbjct: 529 PNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDL 588

Query: 183 XXXXCSRGVVKKRSAEQVVVKL 248
               CSRG+VKK SAEQV VK+
Sbjct: 589 LNELCSRGLVKKSSAEQVAVKM 610


>ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533268|gb|EEF35021.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 443

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/82 (57%), Positives = 55/82 (67%)
 Frame = +3

Query: 3   PNVLTYNAVMVGLCKARKTDRAIDFLGYMVTKGCKPTEGTYMILIXXXXXXXXXXXXXXX 182
           PN +TYNA+M+GLCKARKTDRAIDFL YMV +GCKPTE +Y ILI               
Sbjct: 362 PNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALEL 421

Query: 183 XXXXCSRGVVKKRSAEQVVVKL 248
               C RGVVKK SAE+V V++
Sbjct: 422 LNELCLRGVVKKSSAEKVAVRM 443


>emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 46/82 (56%), Positives = 56/82 (68%)
 Frame = +3

Query: 3   PNVLTYNAVMVGLCKARKTDRAIDFLGYMVTKGCKPTEGTYMILIXXXXXXXXXXXXXXX 182
           PN +TYN++M+GLCK+R+TDRAIDFL YM++K CKPTE TY ILI               
Sbjct: 472 PNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDL 531

Query: 183 XXXXCSRGVVKKRSAEQVVVKL 248
               CSRG+VKK SAEQV VK+
Sbjct: 532 LNELCSRGLVKKSSAEQVAVKM 553


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