BLASTX nr result

ID: Atractylodes21_contig00036638 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036638
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]   216   5e-54
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   189   6e-46
gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo s...   168   1e-39
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                   165   1e-38
ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232...   163   5e-38

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score =  216 bits (550), Expect = 5e-54
 Identities = 126/279 (45%), Positives = 170/279 (60%), Gaps = 11/279 (3%)
 Frame = +3

Query: 6    EKVMEGTFIKGLKPELRATVRLLQPTGLSQAMKLAIMVDENKTGNIRDYGKGTPKTAQIR 185
            E+VME TF+ GL PE+RA  RLLQP GL   M++A  V++             PK+ ++ 
Sbjct: 883  EEVMESTFMNGLLPEIRAEQRLLQPYGLGHLMEMAQRVEDRNLAMRAAREPNGPKSTKML 942

Query: 186  YGGS------GARPTTTPVAGGSRLATEGTKQPFKRMTDSELAAKRAKGLCFRCDGKFSP 347
               +      G    T  VA G +  ++  + P KR+T+SEL A+R KGL F+C+ KFSP
Sbjct: 943  STANRGEWKIGENFQTRAVAVGEKTMSQRREIPIKRLTESELQARREKGLWFKCEEKFSP 1002

Query: 348  GHKCPEKSLQVLVVXXXXXXXXXXXXXXXXHAHL-----DAVEVSVHSVVGITSPHTMKL 512
            GH+C +K L+VL+V                         DAVE+S++SVVG+T+P TMK+
Sbjct: 1003 GHRC-KKELRVLLVHEDEEEDDNQFDDRATEEPALIELKDAVELSLNSVVGLTTPGTMKI 1061

Query: 513  KGRIQGFTVVVLIDSGATHNFLSLELVKPLGLQVTGNYETGVTMGNGKSEFCYGICRKVE 692
            KG I    V++L+DSGATHNFLSLELV+ L L +T     GV MG G S    GICR V 
Sbjct: 1062 KGTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMGTGISVKGKGICRGVC 1121

Query: 693  LSLPGISVTDDFYPLELGSTNVILGVKWLRQLGDVRVNW 809
            +S+ G++V +DF PLELG+T+VILG+ WL  LGDV+VNW
Sbjct: 1122 ISMQGLTVVEDFLPLELGNTDVILGMPWLGTLGDVKVNW 1160


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  189 bits (480), Expect = 6e-46
 Identities = 115/300 (38%), Positives = 164/300 (54%), Gaps = 31/300 (10%)
 Frame = +3

Query: 3    PEKVMEGTFIKGLKPELRATVRLLQPTGLSQAMKLAIMVDEN-----------KTGNIRD 149
            PE+++ G FI GL PEL++ +R+L P  L QAM+LA+ ++E            ++G+   
Sbjct: 286  PEEILMGKFIHGLNPELQSEIRVLNPYNLDQAMELALKLEERNRVNGARRTGPRSGSFSI 345

Query: 150  YGKGTPKTAQIR--YGGSGARPTTTPV----AGGSRLATEGTKQP---------FKRMTD 284
            Y +G      +   YG  G    +T      +  S+ +    K P          +R+T+
Sbjct: 346  YNRGPNSNPSLPSVYGSQGGSNASTKSWAINSNASQTSVNNAKPPPLSSRGFGEMRRLTE 405

Query: 285  SELAAKRAKGLCFRCDGKFSPGHKCPEKSLQVLVVXXXXXXXXXXXXXXXXHAHLDA--- 455
             EL  KRAKGLCF+CD K+  GH+C  K L VL +                         
Sbjct: 406  KELQEKRAKGLCFKCDEKWGVGHQCRRKELSVLFMEDNEEDELEGALSGSEAPPSPTEEI 465

Query: 456  -VEVSVHSVVGITSPHTMKLKGRIQGFTVVVLIDSGATHNFLSLELVKPLGLQVTGNYET 632
              EVS++SV+G+++P TMKL G I    VVV+ID GATHNFLSL+ +  LG+ VT + E 
Sbjct: 466  PPEVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESEEF 525

Query: 633  GVTMGNGKSEFCYGICRKVELSLP-GISVTDDFYPLELGSTNVILGVKWLRQLGDVRVNW 809
            GV++G+G++    GICR V L L  G+ V +DF PL LG+++VILGV+WL  LG V  NW
Sbjct: 526  GVSLGDGQAVRGTGICRAVALYLDGGLVVVEDFLPLGLGNSDVILGVQWLETLGTVVSNW 585


>gb|ADN34016.1| ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo]
          Length = 1185

 Score =  168 bits (425), Expect = 1e-39
 Identities = 103/291 (35%), Positives = 157/291 (53%), Gaps = 23/291 (7%)
 Frame = +3

Query: 6    EKVMEGTFIKGLKPELRATVRLLQPTGLSQAMKLAIMVDEN----KTG------------ 137
            E+V+EGTF  GL P +R  V  ++  GL   M+ A + +E     K G            
Sbjct: 181  EEVLEGTFTNGLDPRIRKEVFAMRVVGLEDLMEAAQLAEEKAEVTKGGPYPYPYSKEAAK 240

Query: 138  -NIRDYGK--GTPKTAQIRYGGSGARPTTTPVAGGSR-LATEGTKQP-FKRMTDSELAAK 302
             N+    K  G+P T  +         T+      S  +   G ++P ++R  DS+L A+
Sbjct: 241  TNLGSSPKTFGSPPTKMVTLAKKVVNQTSNSNTSQSHTVGGGGRREPSYRRWIDSKLQAR 300

Query: 303  RAKGLCFRCDGKFSPGHKCPEKSLQVLVVXXXXXXXXXXXXXXXXHAHL--DAVEVSVHS 476
            + KGLC+RCD  FS GH+C  + L++ VV                        VE+S+ S
Sbjct: 301  KEKGLCYRCDKPFSKGHRCKNRELKLCVVADDLIDTEMSEEDNDGGMVEIGPIVELSLSS 360

Query: 477  VVGITSPHTMKLKGRIQGFTVVVLIDSGATHNFLSLELVKPLGLQVTGNYETGVTMGNGK 656
            VVG+T+P T K+KG+++   VVV+ID GATHNF+SL LV+ + +  T   + GV MG+GK
Sbjct: 361  VVGLTAPGTSKIKGKVEDREVVVMIDCGATHNFISLRLVEEMQIATTETTQYGVIMGSGK 420

Query: 657  SEFCYGICRKVELSLPGISVTDDFYPLELGSTNVILGVKWLRQLGDVRVNW 809
            +    G+C  V + LPG++V +DF PLELG  +++LG++WL + G + V+W
Sbjct: 421  AVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLDMVLGMQWLPKQGAMTVDW 471


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score =  165 bits (418), Expect = 1e-38
 Identities = 97/311 (31%), Positives = 158/311 (50%), Gaps = 42/311 (13%)
 Frame = +3

Query: 3    PEKVMEGTFIKGLKPELRATVRLLQPTGLSQAMKLAIMVDENKTGNIR------------ 146
            PE + +  F+  LK E++  VR++ P+ L  AM+LA+ V+E      +            
Sbjct: 211  PESIAQAQFVSKLKEEIKNEVRIMGPSSLDHAMELAVQVEEKLNHRPKKKWESKASSYSA 270

Query: 147  --------------------DYGKGTPKTAQIRYGGSGARPTTTPVAGGSRLATEGTKQP 266
                                +Y   T  T   ++       +T+  +      T    +P
Sbjct: 271  HNPNSYIPKPTLSAKPTYSFNYPTQTHNTPYNQFPAPSHHSSTSINSPNKPKTTLPIAKP 330

Query: 267  F---KRMTDSELAAKRAKGLCFRCDGKFSPGHKCPEKSLQVLVVXXXXXXXXXXXXXXXX 437
            F   +R+++ EL  KR  GLCFRCD K++ GH+C +K L +L+                 
Sbjct: 331  FGEIRRLSEKELQYKREHGLCFRCDEKWAIGHRCKKKELSILLGHEEEEEEYGSLMENIQ 390

Query: 438  HAHLD-------AVEVSVHSVVGITSPHTMKLKGRIQGFTVVVLIDSGATHNFLSLELVK 596
             AH D       + E+S++SV+GI+SP T+K++G I G  V+V++D GATHNF+SL+ V+
Sbjct: 391  PAHPDDSQLEIHSPEISLNSVMGISSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVR 450

Query: 597  PLGLQVTGNYETGVTMGNGKSEFCYGICRKVELSLPGISVTDDFYPLELGSTNVILGVKW 776
             L + ++ +   GV++G G      G C+ V L L G+ V +D+ PL LG++++ILGV+W
Sbjct: 451  RLQIPISSSRPFGVSLGTGAEAHGQGECKAVPLHLQGVCVMEDYLPLTLGNSDLILGVQW 510

Query: 777  LRQLGDVRVNW 809
            L +LG +  NW
Sbjct: 511  LEKLGTMVTNW 521


>ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232566 [Cucumis sativus]
          Length = 707

 Score =  163 bits (412), Expect = 5e-38
 Identities = 102/297 (34%), Positives = 157/297 (52%), Gaps = 29/297 (9%)
 Frame = +3

Query: 6    EKVMEGTFIKGLKPELRATVRLLQPTGLSQAMKLAIMVDENKTGNIRDYGKGTPKTAQIR 185
            +KV+E TF+ GLKP ++A +   +P GLSQ M++A  V EN+    R+        A++ 
Sbjct: 217  DKVVEETFMLGLKPWIQAEMDFCEPQGLSQMMRIAQKV-ENREDIRREANLPGYSGAKLN 275

Query: 186  YGGSGARPTTTPVAGGSR---------LATEGTKQP-------FKRMTDSELAAKRAKGL 317
              GSG + +T   +G S+         +   GT           KR++D+E  +++ KGL
Sbjct: 276  NSGSGNKNSTMGNSGESKGNWNWPMRTITLRGTADEEVRKTGLTKRLSDAEFQSRKEKGL 335

Query: 318  CFRCDGKFSPGHKCP---EKSLQVLVVXXXXXXXXXXXXXXXXHAHLDA----------V 458
            CFRC+ K+S  HKC    ++ L++LVV                   L            V
Sbjct: 336  CFRCNEKYSHDHKCKMKEQRELRMLVVMGENEEYEIIEEEEVEQKELSVAEVIQEEHAVV 395

Query: 459  EVSVHSVVGITSPHTMKLKGRIQGFTVVVLIDSGATHNFLSLELVKPLGLQVTGNYETGV 638
            E+S++SVVG+++P TMK+KG++ G  ++VLID  ATHNF+   LV+ L +        GV
Sbjct: 396  ELSINSVVGLSNPRTMKVKGKLLGRQIIVLIDCEATHNFIREGLVEELQISTKSTTNYGV 455

Query: 639  TMGNGKSEFCYGICRKVELSLPGISVTDDFYPLELGSTNVILGVKWLRQLGDVRVNW 809
             +G+G +    G+C  +E+ +    V DDF PLELG  + ILG++WL  LG   V+W
Sbjct: 456  ILGSGTAIKGKGVCEAIEMMIGEWRVIDDFLPLELGGVDAILGMQWLYSLGITEVDW 512


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