BLASTX nr result

ID: Atractylodes21_contig00036531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00036531
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-...   158   4e-37
ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-...   156   1e-36
ref|XP_003630305.1| DNA excision repair protein ERCC-6-like prot...   156   2e-36
ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-...   154   7e-36
ref|XP_002309928.1| chromatin remodeling complex subunit [Populu...   152   4e-35

>ref|XP_002264260.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
           gi|296088517|emb|CBI37508.3| unnamed protein product
           [Vitis vinifera]
          Length = 1043

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/96 (78%), Positives = 85/96 (88%)
 Frame = -3

Query: 289 HRIIISGTPLQNNLKELWALFNFCCPELLGDKKCFKDKYESAILRGNDKNASDRDKRIGS 110
           HRI++SGTP+QNNLKELWALF+FCCPELLGDK  FK KYES ILRGNDKNASDR+K I S
Sbjct: 491 HRIVVSGTPIQNNLKELWALFSFCCPELLGDKNWFKVKYESPILRGNDKNASDREKHISS 550

Query: 109 AVAQDLRTCIQPYFLRRLKSEVFRDDDATNTAKLSK 2
            VA++LR  IQPYFLRRLK+EVF +DDA+ TAKLSK
Sbjct: 551 RVAKELRERIQPYFLRRLKNEVFHEDDASETAKLSK 586


>ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
          Length = 1030

 Score =  156 bits (395), Expect = 1e-36
 Identities = 74/96 (77%), Positives = 85/96 (88%)
 Frame = -3

Query: 289 HRIIISGTPLQNNLKELWALFNFCCPELLGDKKCFKDKYESAILRGNDKNASDRDKRIGS 110
           HRIIISGTPLQNNLKELWALFNFCCPELLGD K FK+++E+ ILRGNDK+ASDR+KR+GS
Sbjct: 487 HRIIISGTPLQNNLKELWALFNFCCPELLGDHKWFKERFENPILRGNDKHASDREKRVGS 546

Query: 109 AVAQDLRTCIQPYFLRRLKSEVFRDDDATNTAKLSK 2
           +VA++LR  I PYFLRRLKSEVF  DD   TAKLS+
Sbjct: 547 SVAKELRDRIHPYFLRRLKSEVFNQDDEKTTAKLSQ 582


>ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago
           truncatula] gi|355524327|gb|AET04781.1| DNA excision
           repair protein ERCC-6-like protein [Medicago truncatula]
          Length = 1129

 Score =  156 bits (394), Expect = 2e-36
 Identities = 76/96 (79%), Positives = 84/96 (87%)
 Frame = -3

Query: 289 HRIIISGTPLQNNLKELWALFNFCCPELLGDKKCFKDKYESAILRGNDKNASDRDKRIGS 110
           HRIIISGTPLQNNLKELWALFNFCCP+LLGDKK FKDKYE+ IL+GNDKNAS R+K IGS
Sbjct: 546 HRIIISGTPLQNNLKELWALFNFCCPDLLGDKKWFKDKYETPILKGNDKNASAREKCIGS 605

Query: 109 AVAQDLRTCIQPYFLRRLKSEVFRDDDATNTAKLSK 2
           +VA++LR  IQPYFLRRLKSEVF  D    TAKLS+
Sbjct: 606 SVAKELRDHIQPYFLRRLKSEVFNQDTEKTTAKLSQ 641


>ref|XP_004143401.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cucumis
           sativus]
          Length = 1016

 Score =  154 bits (389), Expect = 7e-36
 Identities = 75/96 (78%), Positives = 82/96 (85%)
 Frame = -3

Query: 289 HRIIISGTPLQNNLKELWALFNFCCPELLGDKKCFKDKYESAILRGNDKNASDRDKRIGS 110
           HRIIISGTPLQNNLKELWALFNFCCP+LLGDK  FK+ YESAILRGNDK AS+RDKRIGS
Sbjct: 490 HRIIISGTPLQNNLKELWALFNFCCPDLLGDKHWFKEHYESAILRGNDKKASERDKRIGS 549

Query: 109 AVAQDLRTCIQPYFLRRLKSEVFRDDDATNTAKLSK 2
            VA+ LR  IQPYFLRR+KSEVF +D+     KLSK
Sbjct: 550 VVAKGLRERIQPYFLRRMKSEVFNEDNDQAATKLSK 585


>ref|XP_002309928.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222852831|gb|EEE90378.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 1108

 Score =  152 bits (383), Expect = 4e-35
 Identities = 73/96 (76%), Positives = 84/96 (87%)
 Frame = -3

Query: 289 HRIIISGTPLQNNLKELWALFNFCCPELLGDKKCFKDKYESAILRGNDKNASDRDKRIGS 110
           H I+ISGTP+QNNLKELWALFNFCCP+LLGD K FK  YE  ILRGN+KNASDR+KRIGS
Sbjct: 550 HCIVISGTPIQNNLKELWALFNFCCPDLLGDNKWFKQTYEHPILRGNEKNASDREKRIGS 609

Query: 109 AVAQDLRTCIQPYFLRRLKSEVFRDDDATNTAKLSK 2
            VA +LR  IQPYFLRR+K+EVF++DDAT TAKLS+
Sbjct: 610 TVAMELRERIQPYFLRRMKNEVFKEDDAT-TAKLSR 644