BLASTX nr result

ID: Atractylodes21_contig00033076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00033076
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28248.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_002308973.1| predicted protein [Populus trichocarpa] gi|2...    85   7e-15
ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex su...    83   2e-14
emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]    83   2e-14
ref|XP_002325199.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12

>emb|CBI28248.3| unnamed protein product [Vitis vinifera]
          Length = 812

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 56/148 (37%), Positives = 88/148 (59%), Gaps = 24/148 (16%)
 Frame = +3

Query: 24  SDIKVNIIGRGKWRQLVIQSWNSRNSMHV--------------EPNLSLTYARRCLLNAL 161
           S++++++IG+GKWRQLV+++  SRN  H               +P LS++ AR+CLLNAL
Sbjct: 489 SEVRIHVIGKGKWRQLVLENGISRNG-HANSVEKGDWLLGDDRQPKLSMSLARQCLLNAL 547

Query: 162 YFLDPS-------NLGPDETIAT--AGQVNPDGEARESKAG-NCTVNASLQKSINEYKGL 311
           + LD S        L  + T+    + +VN +G+A+E K G + T+   LQ SI  Y+ +
Sbjct: 548 HLLDCSASKFAKFGLSSESTLQENESSEVNANGDAKEQKGGPSLTI---LQSSIAVYEDI 604

Query: 312 CGKRNQIILQTVFTDLAFVYLELRNAVK 395
           C + NQ+I Q    +LA+V LEL+N +K
Sbjct: 605 CRRENQMIKQATLANLAYVELELQNPLK 632


>ref|XP_002308973.1| predicted protein [Populus trichocarpa] gi|222854949|gb|EEE92496.1|
           predicted protein [Populus trichocarpa]
          Length = 829

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 56/155 (36%), Positives = 83/155 (53%), Gaps = 31/155 (20%)
 Frame = +3

Query: 24  SDIKVNIIGRGKWRQLVIQSWNSRN-------------SMHVEPNLSLTYARRCLLNALY 164
           SD+ V++ G+GKWR L I++  SRN                 +  LS+  AR+CLLNAL+
Sbjct: 498 SDVTVHVFGKGKWRHLAIENGISRNGYVDSAEKEDMFLGSDGQLKLSVPLARQCLLNALH 557

Query: 165 FLD-----------PSNLGPDE-------TIATAGQVNPDGEARESKAGNCTVNASLQKS 290
            LD           PSNL  DE       ++ + GQVN +G+A+E K G  T   S+Q S
Sbjct: 558 LLDYSGLNHLKPGLPSNLSLDENEMSEAGSMKSLGQVNANGDAKEQKGG--TSQESMQNS 615

Query: 291 INEYKGLCGKRNQIILQTVFTDLAFVYLELRNAVK 395
           I+ ++ +  + NQ++ Q +  +LA+V LEL N  K
Sbjct: 616 ISFHEDIRRRENQLLKQALLANLAYVELELENPEK 650


>ref|XP_002282408.1| PREDICTED: CCR4-NOT transcription complex subunit 10-like [Vitis
            vinifera]
          Length = 857

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 52/176 (29%)
 Frame = +3

Query: 24   SDIKVNIIGRGKWRQLVIQSWNSRNSMHV--------------EPNLSLTYARRCLLNAL 161
            S++++++IG+GKWRQLV+++  SRN  H               +P LS++ AR+CLLNAL
Sbjct: 506  SEVRIHVIGKGKWRQLVLENGISRNG-HANSVEKGDWLLGDDRQPKLSMSLARQCLLNAL 564

Query: 162  YFLDPS--------------------------------NLGPDETIAT-----AGQVNPD 230
            + LD S                                NL   ++ A+      GQVN +
Sbjct: 565  HLLDCSASKFAKFGLSSESTLQENESSEVVSAKNSNHKNLAGSDSKASNITVGLGQVNAN 624

Query: 231  GEARESKAG-NCTVNASLQKSINEYKGLCGKRNQIILQTVFTDLAFVYLELRNAVK 395
            G+A+E K G + T+   LQ SI  Y+ +C + NQ+I Q    +LA+V LEL+N +K
Sbjct: 625  GDAKEQKGGPSLTI---LQSSIAVYEDICRRENQMIKQATLANLAYVELELQNPLK 677


>emb|CAN68892.1| hypothetical protein VITISV_029859 [Vitis vinifera]
          Length = 701

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 59/176 (33%), Positives = 90/176 (51%), Gaps = 52/176 (29%)
 Frame = +3

Query: 24  SDIKVNIIGRGKWRQLVIQSWNSRNSMHV--------------EPNLSLTYARRCLLNAL 161
           S++++++IG+GKWRQLV+++  SRN  H               +P LS++ AR+CLLNAL
Sbjct: 350 SEVRIHVIGKGKWRQLVLENGISRNG-HANSVEKGDWLLGDXRQPKLSMSLARQCLLNAL 408

Query: 162 YFLDPS--------------------------------NLGPDETIAT-----AGQVNPD 230
           + LD S                                NL   ++ A+      GQVN +
Sbjct: 409 HLLDCSASKFAKFGLSSESTLQENESSEVVSAKNSNHKNLAGSDSKASNITVGLGQVNAN 468

Query: 231 GEARESKAG-NCTVNASLQKSINEYKGLCGKRNQIILQTVFTDLAFVYLELRNAVK 395
           G+A+E K G + T+   LQ SI  Y+ +C + NQ+I Q    +LA+V LEL+N +K
Sbjct: 469 GDAKEQKGGPSLTI---LQSSIAVYEDICRRENQMIKQATLANLAYVELELQNPLK 521


>ref|XP_002325199.1| predicted protein [Populus trichocarpa] gi|222866633|gb|EEF03764.1|
           predicted protein [Populus trichocarpa]
          Length = 841

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 35/159 (22%)
 Frame = +3

Query: 24  SDIKVNIIGRGKWRQLVIQSWNSRNSMHVEPNLSLTYARRCLLNALYFLD---------- 173
           SD+ V++ G+GKWR L I++  SRN        SL+ AR+CL NAL+ LD          
Sbjct: 513 SDVTVHVFGKGKWRHLAIENGISRNG-------SLSLARQCLRNALHLLDYSELNHLKPG 565

Query: 174 -PSNLGPDE------------------------TIATAGQVNPDGEARESKAGNCTVNAS 278
            PSN+  DE                        +    GQVN +G+A+E K G  T    
Sbjct: 566 LPSNISLDENELSEEGSMKSSNHKNLTGLDSKASTVGLGQVNANGDAKEQKGG--TSQEI 623

Query: 279 LQKSINEYKGLCGKRNQIILQTVFTDLAFVYLELRNAVK 395
           +Q SI+ ++ +  + NQ+I Q +  +LA+V LEL N  K
Sbjct: 624 MQNSISFHEDIRRRENQMIKQALLANLAYVELELENPEK 662


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