BLASTX nr result
ID: Atractylodes21_contig00032640
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00032640
(1203 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a... 527 e-147
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026... 489 e-136
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m... 489 e-136
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ... 483 e-134
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu... 482 e-134
>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A member 3-like 1-like
[Vitis vinifera]
Length = 874
Score = 527 bits (1357), Expect = e-147
Identities = 269/404 (66%), Positives = 315/404 (77%), Gaps = 4/404 (0%)
Frame = +3
Query: 3 SMDLFSLMAFLRFDPFSTKSYWYSLVQRPIAQGSEKGLSRLQALMATISLRRTKEKTLIG 182
+ DLFSLMAFLRF+PFS KSYW SLVQRP+ QG EKGLSRLQ LMATISLRRTK+K LIG
Sbjct: 468 TFDLFSLMAFLRFEPFSIKSYWQSLVQRPLGQGKEKGLSRLQVLMATISLRRTKDKGLIG 527
Query: 183 LPPKTIHTCYVELSVDERKLYDEMESKAKAFVASHIAKGSVTLNYSTVLSIILRLRQICT 362
LPPK++ TC+VELS +ER+LYD+ME++ K + +I GSV NYSTVL IILRLRQICT
Sbjct: 528 LPPKSVETCFVELSAEERELYDQMEAEGKCVIRDYIDAGSVMRNYSTVLGIILRLRQICT 587
Query: 363 HTELCPSDVRASLWSYNFEDASNNPELLKKLVLQLQDGEDLDCPICLSPPTEMIITSCAH 542
LCPSD+R+ L S N ED SNNPELLKK+VL LQDGED DCPIC+SPPT ++IT CAH
Sbjct: 588 DVALCPSDLRSLLLSNNIEDVSNNPELLKKMVLVLQDGEDFDCPICISPPTNIVITCCAH 647
Query: 543 IFCRTCIVRTLKDSICLCPLCRRRLSESDLFSPPPEYAD----EIGASSCKASSKVGTLL 710
IFCR CI++TLK + CPLCR LS+SDLFS PPE + EI +S C SSKV TLL
Sbjct: 648 IFCRVCILKTLKRTKPCCPLCRHPLSQSDLFSAPPESTETDNSEIPSSEC-TSSKVLTLL 706
Query: 711 KLLEASRDENPSIKSVIFSQFRKXXXXXXXXXKAAGFKTVRLDGVMTAKRRAHVIKEFGV 890
K L ASRD+NPS KSV+FSQFRK KAAGFKT+RLDG M AKRRA VI+EFG
Sbjct: 707 KFLSASRDQNPSTKSVVFSQFRKMLLLLEQPLKAAGFKTLRLDGSMNAKRRAQVIEEFGA 766
Query: 891 ATPGGPTVLLASLKASGTGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKVVK 1070
P GPTVLLASLKASG GINLTAASRVYL+EPWWNPAVEEQAMDRVHRIGQKE+VK+V+
Sbjct: 767 PGPNGPTVLLASLKASGAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVR 826
Query: 1071 MIARDSIDERIVXXXXXXXXXXXXXFRNKGKGKEEKRDINLDDL 1202
+IAR+SI+ERI+ F +G +++R++ ++DL
Sbjct: 827 LIARNSIEERILELQERKKKLAKEAFGR--RGLKDRREVGVEDL 868
>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
helicase-like transcription factor-like protein
[Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
At5g05130 [Arabidopsis thaliana]
gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
thaliana]
Length = 862
Score = 489 bits (1258), Expect = e-136
Identities = 251/405 (61%), Positives = 307/405 (75%), Gaps = 5/405 (1%)
Frame = +3
Query: 3 SMDLFSLMAFLRFDPFSTKSYWYSLVQRPIAQGSEKGLSRLQALMATISLRRTKEKTLIG 182
S DL+SLMAFLRF+PFS KSYW SL+QRP+ QG++KGLSRLQ LMATISLRRTKEK+LIG
Sbjct: 454 SFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIG 513
Query: 183 LPPKTIHTCYVELSVDERKLYDEMESKAKAFVASHIAKGSVTLNYSTVLSIILRLRQICT 362
LPPKT+ TCYVELS +ER+LYD ME +AK V + I GS+ NYSTVLSIILRLRQ+C
Sbjct: 514 LPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCD 573
Query: 363 HTELCPSDVRASLWSYNFEDASNNPELLKKLVLQLQDGEDLDCPICLSPPTEMIITSCAH 542
LCP ++R+ S + ED ++ PELL+KLV LQDGED DCPIC+SPPT +IIT CAH
Sbjct: 574 DMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAH 633
Query: 543 IFCRTCIVRTLKDSICLCPLCRRRLSESDLFS---PPPEYADEIG--ASSCKASSKVGTL 707
IFCR CI++TL+ S LCPLCR L++SDL++ PPP+ ++ G A S SSKV L
Sbjct: 634 IFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSAL 693
Query: 708 LKLLEASRDENPSIKSVIFSQFRKXXXXXXXXXKAAGFKTVRLDGVMTAKRRAHVIKEFG 887
L LL ASR ENP+ KSV+FSQFRK KAAGF +RLDG MT K+R VI EFG
Sbjct: 694 LSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFG 753
Query: 888 VATPGGPTVLLASLKASGTGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKVV 1067
GP VLLASLKASGTGINLTAASRVYL +PWWNPAVEEQAMDR+HRIGQK+EVK++
Sbjct: 754 NPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMI 813
Query: 1068 KMIARDSIDERIVXXXXXXXXXXXXXFRNKGKGKEEKRDINLDDL 1202
+MIAR+SI+ER++ F K + K+++R++N++D+
Sbjct: 814 RMIARNSIEERVLELQQKKKNLANEAF--KRRQKKDEREVNVEDV 856
>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member
3-like 1; Short=SMARCA3-like protein 1
gi|10178052|dbj|BAB11535.1| helicase-like transcription
factor-like protein [Arabidopsis thaliana]
Length = 881
Score = 489 bits (1258), Expect = e-136
Identities = 251/405 (61%), Positives = 307/405 (75%), Gaps = 5/405 (1%)
Frame = +3
Query: 3 SMDLFSLMAFLRFDPFSTKSYWYSLVQRPIAQGSEKGLSRLQALMATISLRRTKEKTLIG 182
S DL+SLMAFLRF+PFS KSYW SL+QRP+ QG++KGLSRLQ LMATISLRRTKEK+LIG
Sbjct: 473 SFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIG 532
Query: 183 LPPKTIHTCYVELSVDERKLYDEMESKAKAFVASHIAKGSVTLNYSTVLSIILRLRQICT 362
LPPKT+ TCYVELS +ER+LYD ME +AK V + I GS+ NYSTVLSIILRLRQ+C
Sbjct: 533 LPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCD 592
Query: 363 HTELCPSDVRASLWSYNFEDASNNPELLKKLVLQLQDGEDLDCPICLSPPTEMIITSCAH 542
LCP ++R+ S + ED ++ PELL+KLV LQDGED DCPIC+SPPT +IIT CAH
Sbjct: 593 DMSLCPPELRSFTTSTSVEDVTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAH 652
Query: 543 IFCRTCIVRTLKDSICLCPLCRRRLSESDLFS---PPPEYADEIG--ASSCKASSKVGTL 707
IFCR CI++TL+ S LCPLCR L++SDL++ PPP+ ++ G A S SSKV L
Sbjct: 653 IFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDSSNTDGEDAKSSTKSSKVSAL 712
Query: 708 LKLLEASRDENPSIKSVIFSQFRKXXXXXXXXXKAAGFKTVRLDGVMTAKRRAHVIKEFG 887
L LL ASR ENP+ KSV+FSQFRK KAAGF +RLDG MT K+R VI EFG
Sbjct: 713 LSLLMASRQENPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFG 772
Query: 888 VATPGGPTVLLASLKASGTGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKVV 1067
GP VLLASLKASGTGINLTAASRVYL +PWWNPAVEEQAMDR+HRIGQK+EVK++
Sbjct: 773 NPELTGPVVLLASLKASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMI 832
Query: 1068 KMIARDSIDERIVXXXXXXXXXXXXXFRNKGKGKEEKRDINLDDL 1202
+MIAR+SI+ER++ F K + K+++R++N++D+
Sbjct: 833 RMIARNSIEERVLELQQKKKNLANEAF--KRRQKKDEREVNVEDV 875
>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297316976|gb|EFH47398.1| SNF2 domain-containing
protein [Arabidopsis lyrata subsp. lyrata]
Length = 861
Score = 483 bits (1244), Expect = e-134
Identities = 247/405 (60%), Positives = 302/405 (74%), Gaps = 5/405 (1%)
Frame = +3
Query: 3 SMDLFSLMAFLRFDPFSTKSYWYSLVQRPIAQGSEKGLSRLQALMATISLRRTKEKTLIG 182
S DL+SLMAFLRF+PFS KSYW SL+QRP+ QG++KGLSRLQ LMATISLRRTKEK+LIG
Sbjct: 453 SFDLYSLMAFLRFEPFSIKSYWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIG 512
Query: 183 LPPKTIHTCYVELSVDERKLYDEMESKAKAFVASHIAKGSVTLNYSTVLSIILRLRQICT 362
LPPKT+ TCYVELS +ER+LYD ME +AK V + I GS+ NYSTVLSIILRLRQ+C
Sbjct: 513 LPPKTVETCYVELSPEERQLYDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCD 572
Query: 363 HTELCPSDVRASLWSYNFEDASNNPELLKKLVLQLQDGEDLDCPICLSPPTEMIITSCAH 542
LCP ++R+ S + ED + PELL+KL+ LQDGED DCPIC+SPPT +IIT CAH
Sbjct: 573 DISLCPPELRSFTTSTSVEDVIDKPELLQKLIAVLQDGEDFDCPICISPPTNIIITRCAH 632
Query: 543 IFCRTCIVRTLKDSICLCPLCRRRLSESDLFSPPPEYADEIG-----ASSCKASSKVGTL 707
IFCR CI++TL+ S LCPLCR L++SDL++ PP D+ S SSKV L
Sbjct: 633 IFCRACILQTLQRSKPLCPLCRGSLTQSDLYNAPPPPPDDSNTDGEDTKSSTKSSKVSAL 692
Query: 708 LKLLEASRDENPSIKSVIFSQFRKXXXXXXXXXKAAGFKTVRLDGVMTAKRRAHVIKEFG 887
L LL ASR E+P+ KSV+FSQFRK KAAGF +RLDG MT K+R VI EFG
Sbjct: 693 LSLLIASRQESPNTKSVVFSQFRKMLLLLETPLKAAGFTILRLDGAMTLKKRTQVIGEFG 752
Query: 888 VATPGGPTVLLASLKASGTGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKVV 1067
GP VLLASLKASG GINLTAASRVYL++PWWNPAVEEQAMDR+HRIGQK+EVK++
Sbjct: 753 NPELTGPVVLLASLKASGAGINLTAASRVYLLDPWWNPAVEEQAMDRIHRIGQKQEVKMI 812
Query: 1068 KMIARDSIDERIVXXXXXXXXXXXXXFRNKGKGKEEKRDINLDDL 1202
+MIARDSI+ER++ F K + K+++R++N++D+
Sbjct: 813 RMIARDSIEERVLELQQKKKNLANEAF--KRRQKKDEREVNVEDV 855
>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222854852|gb|EEE92399.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 799
Score = 482 bits (1240), Expect = e-134
Identities = 250/403 (62%), Positives = 302/403 (74%), Gaps = 3/403 (0%)
Frame = +3
Query: 3 SMDLFSLMAFLRFDPFSTKSYWYSLVQRPIAQGSEKGLSRLQALMATISLRRTKEKTLIG 182
S+DLFSLMAFLRF+PFS KSYW SL+QRP+AQG++KGLSRLQ LMATISLRRTK+K ++G
Sbjct: 393 SLDLFSLMAFLRFEPFSIKSYWQSLLQRPLAQGNKKGLSRLQVLMATISLRRTKDKGVVG 452
Query: 183 LPPKTIHTCYVELSVDERKLYDEMESKAKAFVASHIAKGSVTLNYSTVLSIILRLRQICT 362
LP KT+ T Y+ELS +ER+LYD+ME++AK V + I ++ N+STVL IILRLRQIC
Sbjct: 453 LPSKTVETHYIELSGEERELYDQMEAEAKGVVQNFINTNNLMRNFSTVLCIILRLRQICN 512
Query: 363 HTELCPSDVRASLWSYNFEDASNNPELLKKLVLQLQDGEDLDCPICLSPPTEMIITSCAH 542
LCPSD+R+ L S + ED SNNPELL K+V LQDGED DCPIC+ PPTE +IT CAH
Sbjct: 513 DLALCPSDLRSLLPSNSIEDVSNNPELLMKMVTVLQDGEDFDCPICICPPTETVITRCAH 572
Query: 543 IFCRTCIVRTLKDSICLCPLCRRRLSESDLFSPPPEYADEIGA---SSCKASSKVGTLLK 713
IFCR CI++TL+ + CPLCRR LS SDLFS PPE + A S SSKV L+K
Sbjct: 573 IFCRPCILKTLQRAKQCCPLCRRPLSVSDLFSAPPESSGSDNANTSSRTTTSSKVSALIK 632
Query: 714 LLEASRDENPSIKSVIFSQFRKXXXXXXXXXKAAGFKTVRLDGVMTAKRRAHVIKEFGVA 893
LL ASR ENP+ KSV+FSQF+K K AGFK +RLDG M AK+RA VIK+FGV
Sbjct: 633 LLIASRVENPARKSVVFSQFQKMLVLLEEPLKEAGFKILRLDGSMNAKKRAQVIKQFGVP 692
Query: 894 TPGGPTVLLASLKASGTGINLTAASRVYLMEPWWNPAVEEQAMDRVHRIGQKEEVKVVKM 1073
P GPTVLLASLKASG GINL ASRVYL+EPWWNPAVEEQAMDRVHRIGQ+E+V VV++
Sbjct: 693 GPDGPTVLLASLKASGAGINLAVASRVYLLEPWWNPAVEEQAMDRVHRIGQEEDVTVVRL 752
Query: 1074 IARDSIDERIVXXXXXXXXXXXXXFRNKGKGKEEKRDINLDDL 1202
IA+ SI+ERI+ F +G + +R++ +DDL
Sbjct: 753 IAQSSIEERILEMQERKKKLAKEAFGR--RGTKTQREVGIDDL 793