BLASTX nr result

ID: Atractylodes21_contig00032331 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032331
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    60   3e-07
ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232...    59   7e-07
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    57   3e-06
ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223...    56   3e-06
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    56   4e-06

>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 27/52 (51%), Positives = 35/52 (67%)
 Frame = +1

Query: 403 KGHRLELPTFDGSDPDGWLLRAERYCSLNRLTNEERLEVAVIAFEGTRSVGF 558
           K  RL+LP F G++PDGW+LR ERY    RL  EE+LE AV+A +G   + F
Sbjct: 78  KAKRLDLPIFTGTNPDGWILRTERYFGFYRLAAEEQLEAAVVALDGEALLWF 129


>ref|XP_004164098.1| PREDICTED: uncharacterized protein LOC101232566 [Cucumis sativus]
          Length = 707

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
 Frame = +1

Query: 160 GRMPSVSTRVDEMEE-TQRLYQTKVENLEENVQ--TIMQQMGTLLRFHEESAKRNAESGG 330
           G++P++   ++++ +  +R  Q  +  +E   Q  + M +  T L       K N +  G
Sbjct: 20  GKLPAIEKALNDLAKGLERQNQMMIRFMESAAQERSTMNEKITELSIRSTPMKNNDD--G 77

Query: 331 NGGIXXXXXXXXXXVYDNHLFLTVKGHR----LELPTFDGSDPDGWLLRAERYCSLNRLT 498
            G            V  N       G R    +E+P F+G DPD WL RAERY  +++LT
Sbjct: 78  EGSSIRENEPKKEEVKSNE---DANGDRNKFSVEMPIFNGDDPDSWLFRAERYFQIHKLT 134

Query: 499 NEERLEVAVIAFEG 540
           + E++ VA I+FEG
Sbjct: 135 DFEKMTVATISFEG 148


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 21/46 (45%), Positives = 35/46 (76%)
 Frame = +1

Query: 403 KGHRLELPTFDGSDPDGWLLRAERYCSLNRLTNEERLEVAVIAFEG 540
           +  +L+LP F G++PDGW++RAER+    RLT +E++E AV++ +G
Sbjct: 98  RAKKLDLPVFSGNNPDGWIIRAERFFQFYRLTEDEKVEAAVVSLDG 143


>ref|XP_004172376.1| PREDICTED: uncharacterized protein LOC101223371 [Cucumis sativus]
          Length = 943

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
 Frame = +1

Query: 160 GRMPSVSTRVDEMEE-TQRLYQTKVENLEENVQ--TIMQQMGTLLRFHEESAKRNAESGG 330
           G++P++   ++++ +  +R  Q  V  +E   Q  + M +  T +       K N E  G
Sbjct: 25  GKLPAIEKTLNDLAKGMERQNQMMVRFMESAAQERSTMNEKITEMSMRSTLMKNNGEGEG 84

Query: 331 NGGIXXXXXXXXXXVYDNHLFLTVKGHRLELPTFDGSDPDGWLLRAERYCSLNRLTNEER 510
           +               ++      K  ++E+P F+G DPD WL   ERY  +++LT+ E+
Sbjct: 85  SSVRENEPKNEEKKANEDANCDRNKFKKVEMPIFNGDDPDSWLFCVERYFQIHKLTDFEK 144

Query: 511 LEVAVIAFEG 540
           + VA I+FEG
Sbjct: 145 MTVATISFEG 154


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 22/43 (51%), Positives = 33/43 (76%)
 Frame = +1

Query: 412 RLELPTFDGSDPDGWLLRAERYCSLNRLTNEERLEVAVIAFEG 540
           +L++P FD +DPDGW+LR ER+ +   LT+ E++E AV+A EG
Sbjct: 176 KLDMPAFDDTDPDGWILRGERFFAFYGLTDAEKMEAAVVAMEG 218


Top