BLASTX nr result

ID: Atractylodes21_contig00032067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00032067
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_398361.1| ribosomal protein S11 [Lactuca sativa] gi|91207...   160   1e-37
ref|YP_007353799.1| ribosomal protein S11 (chloroplast) [Chrysan...   160   1e-37
ref|YP_004564405.1| ribosomal protein S11 (chloroplast) [Agerati...   160   1e-37
ref|YP_004465220.1| ribosomal protein S11 [Jacobaea vulgaris] gi...   158   5e-37
ref|YP_001837393.1| ribosomal protein S11 [Guizotia abyssinica] ...   158   7e-37

>ref|YP_398361.1| ribosomal protein S11 [Lactuca sativa]
           gi|91207753|sp|Q332U4.1|RR11_LACSA RecName: Full=30S
           ribosomal protein S11, chloroplastic
           gi|78675202|dbj|BAE47628.1| chloroplast 30S ribosomal
           protein S11 [Lactuca sativa] gi|88657015|gb|ABD47265.1|
           ribosomal protein S11 [Lactuca sativa]
          Length = 136

 Score =  160 bits (406), Expect = 1e-37
 Identities = 85/97 (87%), Positives = 86/97 (88%)
 Frame = -1

Query: 541 MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAXXXXXX 362
           MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSA      
Sbjct: 1   MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTSGFR 60

Query: 361 XXXXXTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPG 251
                TPFAAQTAAG+AIRAVVDQGMQRAEVMIKGPG
Sbjct: 61  GTKRGTPFAAQTAAGHAIRAVVDQGMQRAEVMIKGPG 97


>ref|YP_007353799.1| ribosomal protein S11 (chloroplast) [Chrysanthemum x morifolium]
           gi|372863478|gb|AEX99547.1| ribosomal protein S11
           (chloroplast) [Chrysanthemum indicum]
           gi|375298869|gb|AFA45308.1| ribosomal protein S11
           (chloroplast) [Chrysanthemum x morifolium]
          Length = 145

 Score =  160 bits (405), Expect = 1e-37
 Identities = 85/97 (87%), Positives = 85/97 (87%)
 Frame = -1

Query: 541 MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAXXXXXX 362
           MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSA      
Sbjct: 1   MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTCGFR 60

Query: 361 XXXXXTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPG 251
                TPFAAQTAA NAIRAVVDQGMQRAEVMIKGPG
Sbjct: 61  GTRRGTPFAAQTAAANAIRAVVDQGMQRAEVMIKGPG 97


>ref|YP_004564405.1| ribosomal protein S11 (chloroplast) [Ageratina adenophora]
           gi|452849084|ref|YP_007474762.1| ribosomal protein S11
           (chloroplast) [Chrysanthemum indicum]
           gi|334089706|gb|AEG64589.1| ribosomal protein S11
           (chloroplast) [Ageratina adenophora]
           gi|372863239|gb|AEX99311.1| ribosomal protein S11
           (chloroplast) [Chrysanthemum indicum]
          Length = 136

 Score =  160 bits (405), Expect = 1e-37
 Identities = 85/97 (87%), Positives = 85/97 (87%)
 Frame = -1

Query: 541 MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAXXXXXX 362
           MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSA      
Sbjct: 1   MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTCGFR 60

Query: 361 XXXXXTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPG 251
                TPFAAQTAA NAIRAVVDQGMQRAEVMIKGPG
Sbjct: 61  GTRRGTPFAAQTAAANAIRAVVDQGMQRAEVMIKGPG 97


>ref|YP_004465220.1| ribosomal protein S11 [Jacobaea vulgaris]
           gi|308156114|gb|ADO15442.1| ribosomal protein S11
           [Jacobaea vulgaris]
          Length = 136

 Score =  158 bits (400), Expect = 5e-37
 Identities = 84/97 (86%), Positives = 85/97 (87%)
 Frame = -1

Query: 541 MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAXXXXXX 362
           MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSA      
Sbjct: 1   MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTCGFR 60

Query: 361 XXXXXTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPG 251
                TPFAAQTAA +AIRAVVDQGMQRAEVMIKGPG
Sbjct: 61  GTRRGTPFAAQTAAASAIRAVVDQGMQRAEVMIKGPG 97


>ref|YP_001837393.1| ribosomal protein S11 [Guizotia abyssinica]
           gi|281190749|ref|YP_003330986.1| ribosomal protein S11
           [Parthenium argentatum]
           gi|224493277|sp|B2LMM6.1|RR11_GUIAB RecName: Full=30S
           ribosomal protein S11, chloroplastic
           gi|179366288|gb|ACB86559.1| ribosomal protein S11
           [Guizotia abyssinica] gi|269924862|gb|ACZ52735.1|
           ribosomal protein S11 [Parthenium argentatum]
          Length = 136

 Score =  158 bits (399), Expect = 7e-37
 Identities = 84/97 (86%), Positives = 84/97 (86%)
 Frame = -1

Query: 541 MAKAIPKKGSRGRIGSRKSTRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAXXXXXX 362
           MAKAIPKKGSRGRIGSRKS RKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSA      
Sbjct: 1   MAKAIPKKGSRGRIGSRKSIRKIPKGVIHIQASFNNTIVTVTDVRGRVVSWSSAGTCGFR 60

Query: 361 XXXXXTPFAAQTAAGNAIRAVVDQGMQRAEVMIKGPG 251
                TPFAAQTAA NAIRAVVDQGMQRAEVMIKGPG
Sbjct: 61  GTRRGTPFAAQTAAANAIRAVVDQGMQRAEVMIKGPG 97


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