BLASTX nr result

ID: Atractylodes21_contig00031469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031469
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320064.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|NP_171698.1| SEC7-like guanine nucleotide exchange protein [...    72   5e-11
ref|XP_002889344.1| hypothetical protein ARALYDRAFT_470078 [Arab...    72   5e-11
ref|XP_002301297.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|NP_191645.1| SEC7-like guanine nucleotide exchange family pr...    69   3e-10

>ref|XP_002320064.1| predicted protein [Populus trichocarpa] gi|222860837|gb|EEE98379.1|
           predicted protein [Populus trichocarpa]
          Length = 1783

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/52 (67%), Positives = 43/52 (82%)
 Frame = +3

Query: 90  PSRSSSPGVLHDSGTNELTLAESEFILSPIINACCSETLKIVEPALDCIQKL 245
           PS SS P  LHD G++E +LAESE ILSP+INAC ++ LKIV+PA+DCIQKL
Sbjct: 64  PSESSLPAPLHDGGSHEYSLAESETILSPLINACNTQFLKIVDPAVDCIQKL 115


>ref|NP_171698.1| SEC7-like guanine nucleotide exchange protein [Arabidopsis
           thaliana] gi|75264111|sp|Q9LPC5.1|BIG3_ARATH RecName:
           Full=Brefeldin A-inhibited guanine nucleotide-exchange
           protein 3; Short=BIG3; AltName: Full=ARF
           guanine-nucleotide exchange factor BIG3; AltName:
           Full=Protein EMBRYO SAC DEVELOPMENT ARREST 10
           gi|8570447|gb|AAF76474.1|AC020622_8 Contains similarity
           to a guanine nucleotide exchange factor from Homo
           sapiens gb|AF111162 and contains a Sec7 PF|01369 domain
           [Arabidopsis thaliana] gi|332189239|gb|AEE27360.1|
           SEC7-like guanine nucleotide exchange protein
           [Arabidopsis thaliana]
          Length = 1750

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/61 (63%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = +3

Query: 66  ENQSAV-DEPSRSSSPGVLHDSGTNELTLAESEFILSPIINACCSETLKIVEPALDCIQK 242
           EN S V D  S SS PG LHD G  E +LAESE ILSP+INA  +  LKIV+PA+DCIQK
Sbjct: 48  ENSSPVADSESGSSIPGPLHDGGAAEYSLAESEIILSPLINASSTGVLKIVDPAVDCIQK 107

Query: 243 L 245
           L
Sbjct: 108 L 108


>ref|XP_002889344.1| hypothetical protein ARALYDRAFT_470078 [Arabidopsis lyrata subsp.
           lyrata] gi|297335186|gb|EFH65603.1| hypothetical protein
           ARALYDRAFT_470078 [Arabidopsis lyrata subsp. lyrata]
          Length = 1750

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 39/61 (63%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = +3

Query: 66  ENQSAV-DEPSRSSSPGVLHDSGTNELTLAESEFILSPIINACCSETLKIVEPALDCIQK 242
           EN S V D  S SS PG LHD G  E +LAESE ILSP+INA  +  LKIV+PA+DCIQK
Sbjct: 48  ENSSPVADSDSGSSIPGPLHDGGAAEYSLAESEIILSPLINASSTGVLKIVDPAVDCIQK 107

Query: 243 L 245
           L
Sbjct: 108 L 108


>ref|XP_002301297.1| predicted protein [Populus trichocarpa] gi|222843023|gb|EEE80570.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/54 (64%), Positives = 43/54 (79%)
 Frame = +3

Query: 84  DEPSRSSSPGVLHDSGTNELTLAESEFILSPIINACCSETLKIVEPALDCIQKL 245
           D  S SS PG L+D G+ E +LAESE ILSP+INAC ++ LKIV+PA+DCIQKL
Sbjct: 61  DSSSESSLPGPLYDGGSIEYSLAESESILSPLINACNTQFLKIVDPAVDCIQKL 114


>ref|NP_191645.1| SEC7-like guanine nucleotide exchange family protein [Arabidopsis
           thaliana] gi|75181363|sp|Q9LZX8.1|BIG2_ARATH RecName:
           Full=Brefeldin A-inhibited guanine nucleotide-exchange
           protein 2; Short=BIG2; AltName: Full=ARF
           guanine-nucleotide exchange factor BIG2
           gi|7329696|emb|CAB82690.1| guanine nucleotide exchange
           factor-like protein [Arabidopsis thaliana]
           gi|332646597|gb|AEE80118.1| SEC7-like guanine nucleotide
           exchange family protein [Arabidopsis thaliana]
          Length = 1793

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = +3

Query: 69  NQSAVDEPSRSSSPGVLHDSGTNELTLAESEFILSPIINACCSETLKIVEPALDCIQKL 245
           + +A D  S SS PG L+D G+ E +LA+SE I SP+INAC +   KI+EPA+DCIQKL
Sbjct: 55  SSAATDSESESSVPGPLNDGGSIEYSLADSELIFSPLINACGTGLAKIIEPAIDCIQKL 113


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