BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031467
         (1423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]   569   e-160
ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi...   568   e-159
ref|XP_002510663.1| pentatricopeptide repeat-containing protein,...   563   e-158
ref|XP_002306972.1| predicted protein [Populus trichocarpa] gi|2...   560   e-157
ref|XP_002865541.1| pentatricopeptide repeat-containing protein ...   556   e-156

>emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
          Length = 724

 Score =  569 bits (1467), Expect = e-160
 Identities = 285/414 (68%), Positives = 326/414 (78%), Gaps = 2/414 (0%)
 Frame = +3

Query: 186  HRRYDFSPLLEFLSTYSLDEDDSDYSNSP--TSLDPTELQLAESYRSVPASLWHYLLKXX 359
            +RRYDF+PLL FLS    D D      SP  TSLD TE QL ESYR+VPA LWH LLK  
Sbjct: 139  NRRYDFTPLLRFLSNSESDSDSGAEVESPPPTSLDFTEFQLVESYRAVPAPLWHSLLKSL 198

Query: 360  XXXXXXXXXXXXXYALVDWLHRHNLCFSYELLYSVLIHTLGRSEKLYEAFLLSQKQTLTP 539
                         Y+LV WL RHNLCFSYELLYS+LIH LGRSEKLYEAFLLSQ+QTLTP
Sbjct: 199  CSDSSSIGTA---YSLVTWLERHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQTLTP 255

Query: 540  LTYNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLY 719
            LTYN LIGACARNDDLEKA+ LM++MR +GY SDFVNYS IIQSL R NK DS +L+K+Y
Sbjct: 256  LTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 315

Query: 720  DEMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNL 899
             E++ D IELD QLLNDI++GF KSG+V+RAM FL ++Q NGLSPKT+T+V++I+ LGN 
Sbjct: 316  AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNA 375

Query: 900  GRXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTY 1079
            GR             GGL PRTRAYNA+LKGYV  G L+DAE IV+EMER+G  PDEHTY
Sbjct: 376  GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 435

Query: 1080 SLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQK 1259
            SLLIDAY NAGRWESARIVLKEMEA+ V+PNS+VFSRIL SYRDRG+WQ+ FQVL+EM+ 
Sbjct: 436  SLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRN 495

Query: 1260 CGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGIEPDTVTWNTLIDCHCK 1421
             GV PDR FYN+MIDTFGK NCLDHALAT +RMR EG++PD VTWNTLIDCHCK
Sbjct: 496  SGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCK 549



 Score =  118 bits (296), Expect = 3e-24
 Identities = 75/323 (23%), Positives = 148/323 (45%), Gaps = 7/323 (2%)
 Frame = +3

Query: 456  YSVLIHTLGRSEKLYEAFLL-------SQKQTLTPLTYNVLIGACARNDDLEKAVILMNK 614
            YS +I +L R+ K   + L        S K  L     N +I   A++ D+ +A+  +  
Sbjct: 293  YSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAM 352

Query: 615  MRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTKS 794
            ++G G          +I +L    + +    E +++E+K   +    +  N ++ G+ K+
Sbjct: 353  VQGNGLSPKTATLVAVITALGNAGRTEEA--EAIFEELKEGGLMPRTRAYNALLKGYVKT 410

Query: 795  GNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRAY 974
            G++  A   +  ++ +G SP   T   +I    N GR              G+RP +  +
Sbjct: 411  GSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVF 470

Query: 975  NAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEMEA 1154
            + +L  Y + G  + +  ++ EM  +GV PD H Y+++ID +G     + A      M  
Sbjct: 471  SRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRM 530

Query: 1155 NNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLDH 1334
              V+P++  ++ ++  +   G   +  ++ + MQ+ G  P    YNIMI++FG+    + 
Sbjct: 531  EGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWED 590

Query: 1335 ALATLERMRDEGIEPDTVTWNTL 1403
                L +M+ +G+  + VT+ TL
Sbjct: 591  VKTLLGKMQSQGLLANVVTYTTL 613



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 69/311 (22%), Positives = 141/311 (45%), Gaps = 2/311 (0%)
 Frame = +3

Query: 480  GRSEKLYEAFLLSQKQTLTPLT--YNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNY 653
            GR+E+    F   ++  L P T  YN L+    +   L+ A  ++++M   G+  D   Y
Sbjct: 376  GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 435

Query: 654  SLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVI 833
            SL+I +     + +S  +  +  EM+   +  +  + + I+  +   G   ++   L  +
Sbjct: 436  SLLIDAYANAGRWESARI--VLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 493

Query: 834  QANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCL 1013
            + +G+SP       +I   G                  G++P    +N ++  +  +G  
Sbjct: 494  RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHH 553

Query: 1014 RDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRI 1193
              AE +   M+ +G  P   TY+++I+++G   RWE  + +L +M++  +  N       
Sbjct: 554  NKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLAN------- 606

Query: 1194 LVSYRDRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGI 1373
            +V+Y   G  ++     + M+  G+KP     N +I+ FG+      A + L+ M++  +
Sbjct: 607  VVTYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDL 666

Query: 1374 EPDTVTWNTLI 1406
            +PD VT+ TL+
Sbjct: 667  KPDVVTYTTLM 677



 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 54/232 (23%), Positives = 103/232 (44%)
 Frame = +3

Query: 588  EKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLN 767
            +K+  ++ +MR  G   D   Y+++I +  + N +D  L    +D M+++ ++ D    N
Sbjct: 484  QKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALAT--FDRMRMEGVQPDAVTWN 541

Query: 768  DIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXG 947
             ++    KSG+ ++A      +Q +G SP T+T   +I+  G   R              
Sbjct: 542  TLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQ 601

Query: 948  GLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESA 1127
            GL      Y  +       G    A      M  +G+ P     + LI+A+G   R   A
Sbjct: 602  GLLANVVTYTTL-------GLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEA 654

Query: 1128 RIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCGVKPDRQ 1283
              VL+ M+ N++KP+   ++ ++ +     ++ ++  V +EM   G  PDR+
Sbjct: 655  FSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRK 706


>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Vitis vinifera]
            gi|297745544|emb|CBI40709.3| unnamed protein product
            [Vitis vinifera]
          Length = 695

 Score =  568 bits (1463), Expect = e-159
 Identities = 284/414 (68%), Positives = 326/414 (78%), Gaps = 2/414 (0%)
 Frame = +3

Query: 186  HRRYDFSPLLEFLSTYSLDEDDSDYSNSP--TSLDPTELQLAESYRSVPASLWHYLLKXX 359
            +RRYDF+PLL FLS    D D      SP  TSLD TE QL ESYR+VPA LWH LLK  
Sbjct: 68   NRRYDFTPLLRFLSNSESDSDSGAEVESPPPTSLDFTEFQLVESYRAVPAPLWHSLLKSL 127

Query: 360  XXXXXXXXXXXXXYALVDWLHRHNLCFSYELLYSVLIHTLGRSEKLYEAFLLSQKQTLTP 539
                         Y+LV WL RHNLCFSYELLYS+LIH LGRSEKLYEAFLLSQ+QTLTP
Sbjct: 128  CSDSSSIGTA---YSLVTWLERHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQTLTP 184

Query: 540  LTYNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLY 719
            LTYN LIGACARNDDLEKA+ LM++MR +G+ SDFVNYS IIQSL R NK DS +L+K+Y
Sbjct: 185  LTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIY 244

Query: 720  DEMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNL 899
             E++ D IELD QLLNDI++GF KSG+V+RAM FL ++Q NGLSPKT+T+V++I+ LGN 
Sbjct: 245  AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNA 304

Query: 900  GRXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTY 1079
            GR             GGL PRTRAYNA+LKGYV  G L+DAE IV+EMER+G  PDEHTY
Sbjct: 305  GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 364

Query: 1080 SLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQK 1259
            SLLIDAY NAGRWESARIVLKEMEA+ V+PNS+VFSRIL SYRDRG+WQ+ FQVL+EM+ 
Sbjct: 365  SLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRN 424

Query: 1260 CGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGIEPDTVTWNTLIDCHCK 1421
             GV PDR FYN+MIDTFGK NCLDHALAT +RMR EG++PD VTWNTLIDCHCK
Sbjct: 425  SGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCK 478



 Score =  122 bits (306), Expect = 2e-25
 Identities = 76/327 (23%), Positives = 151/327 (46%), Gaps = 7/327 (2%)
 Frame = +3

Query: 456  YSVLIHTLGRSEKLYEAFLL-------SQKQTLTPLTYNVLIGACARNDDLEKAVILMNK 614
            YS +I +L R+ K   + L        S K  L     N +I   A++ D+ +A+  +  
Sbjct: 222  YSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAM 281

Query: 615  MRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTKS 794
            ++G G          +I +L    + +    E +++E+K   +    +  N ++ G+ K+
Sbjct: 282  VQGNGLSPKTATLVAVITALGNAGRTEEA--EAIFEELKEGGLMPRTRAYNALLKGYVKT 339

Query: 795  GNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRAY 974
            G++  A   +  ++ +G SP   T   +I    N GR              G+RP +  +
Sbjct: 340  GSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVF 399

Query: 975  NAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEMEA 1154
            + +L  Y + G  + +  ++ EM  +GV PD H Y+++ID +G     + A      M  
Sbjct: 400  SRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRM 459

Query: 1155 NNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLDH 1334
              V+P++  ++ ++  +   G   +  ++ + MQ+ G  P    YNIMI++FG+    + 
Sbjct: 460  EGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWED 519

Query: 1335 ALATLERMRDEGIEPDTVTWNTLIDCH 1415
                L +M+ +G+  + VT+ TL+D +
Sbjct: 520  VKTLLGKMQSQGLLANVVTYTTLVDIY 546



 Score =  107 bits (267), Expect = 8e-21
 Identities = 67/312 (21%), Positives = 143/312 (45%), Gaps = 2/312 (0%)
 Frame = +3

Query: 480  GRSEKLYEAFLLSQKQTLTPLT--YNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNY 653
            GR+E+    F   ++  L P T  YN L+    +   L+ A  ++++M   G+  D   Y
Sbjct: 305  GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 364

Query: 654  SLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVI 833
            SL+I +     + +S  +  +  EM+   +  +  + + I+  +   G   ++   L  +
Sbjct: 365  SLLIDAYANAGRWESARI--VLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 422

Query: 834  QANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCL 1013
            + +G+SP       +I   G                  G++P    +N ++  +  +G  
Sbjct: 423  RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHH 482

Query: 1014 RDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRI 1193
              AE +   M+ +G  P   TY+++I+++G   RWE  + +L +M++  +  N   ++ +
Sbjct: 483  NKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL 542

Query: 1194 LVSYRDRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGI 1373
            +  Y   G ++   + L+ M+  G+KP    YN +I+ + +    + A+     MR +G+
Sbjct: 543  VDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGL 602

Query: 1374 EPDTVTWNTLID 1409
            +P  +  N+LI+
Sbjct: 603  KPSVLVLNSLIN 614



 Score =  105 bits (263), Expect = 2e-20
 Identities = 70/288 (24%), Positives = 134/288 (46%)
 Frame = +3

Query: 543  TYNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYD 722
            TY++LI A A     E A I++ +M   G + +   +S I+ S     K       ++  
Sbjct: 363  TYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSF--QVLR 420

Query: 723  EMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLG 902
            EM+   +  D    N ++  F K   +D A+     ++  G+ P   T  ++I      G
Sbjct: 421  EMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSG 480

Query: 903  RXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYS 1082
                           G  P T  YN ++  +       D + ++ +M+  G+  +  TY+
Sbjct: 481  HHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYT 540

Query: 1083 LLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKC 1262
             L+D YG +GR++ A   L+ M++  +KP+S +++ ++ +Y  RG  ++     + M+  
Sbjct: 541  TLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRAD 600

Query: 1263 GVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGIEPDTVTWNTLI 1406
            G+KP     N +I+ FG+      A + L+ M++  ++PD VT+ TL+
Sbjct: 601  GLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLM 648



 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 59/246 (23%), Positives = 110/246 (44%)
 Frame = +3

Query: 546  YNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDE 725
            YNV+I    + + L+ A+   ++MR EG Q D V ++ +I    ++   +    E+L++ 
Sbjct: 434  YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKA--EELFEA 491

Query: 726  MKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGR 905
            M+           N ++  F +    +     LG +Q+ GL     T  +++   G  GR
Sbjct: 492  MQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGR 551

Query: 906  XXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSL 1085
                          GL+P +  YNA++  Y   G    A      M  +G+ P     + 
Sbjct: 552  FKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNS 611

Query: 1086 LIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCG 1265
            LI+A+G   R   A  VL+ M+ N++KP+   ++ ++ +     ++ ++  V +EM   G
Sbjct: 612  LINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSG 671

Query: 1266 VKPDRQ 1283
              PDR+
Sbjct: 672  CTPDRK 677



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 42/205 (20%), Positives = 89/205 (43%)
 Frame = +3

Query: 483  RSEKLYEAFLLSQKQTLTPLTYNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLI 662
            ++E+L+EA   S     T  TYN++I +    +  E    L+ KM+ +G  ++ V Y+ +
Sbjct: 484  KAEELFEAMQESGCSPCTT-TYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL 542

Query: 663  IQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQAN 842
            +    ++ +    +  +  + MK   ++    + N ++  + + G  ++A++   V++A+
Sbjct: 543  VDIYGQSGRFKDAI--ECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRAD 600

Query: 843  GLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDA 1022
            GL P    + S+I+  G   R               L+P    Y  ++K  +        
Sbjct: 601  GLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKV 660

Query: 1023 EWIVNEMERNGVFPDEHTYSLLIDA 1097
              +  EM  +G  PD    ++L  A
Sbjct: 661  PAVYEEMTLSGCTPDRKARAMLRSA 685


>ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551364|gb|EEF52850.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  563 bits (1452), Expect = e-158
 Identities = 286/458 (62%), Positives = 353/458 (77%), Gaps = 2/458 (0%)
 Frame = +3

Query: 54   HRNFSLQSLSIASYKHAPLCSLVTALSLSEDD--VITQEDGVSHYSHRRYDFSPLLEFLS 227
            H +  L  LS  +     + S  + LSLS D+    T++D ++  S RRYDF+PLL FLS
Sbjct: 27   HHHSQLPPLSATNTSATAIASSFSNLSLSLDNNQKDTEQDILALQS-RRYDFTPLLNFLS 85

Query: 228  TYSLDEDDSDYSNSPTSLDPTELQLAESYRSVPASLWHYLLKXXXXXXXXXXXXXXXYAL 407
                   ++  S+SPTSLD TE QLAESYR+VP  LWH LLK               YA+
Sbjct: 86   NQIKASPNT--SSSPTSLDTTEFQLAESYRAVPGPLWHSLLKSLSSSSSSIGLA---YAV 140

Query: 408  VDWLHRHNLCFSYELLYSVLIHTLGRSEKLYEAFLLSQKQTLTPLTYNVLIGACARNDDL 587
            V WL +HNLCFSYELLYS+LIH LGRSEKLYEAFLLSQ+Q L+PLTYN LI ACARN+DL
Sbjct: 141  VSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQQQALSPLTYNALINACARNNDL 200

Query: 588  EKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLN 767
            EKA+ L+++MR +GY SDFVNYSLIIQSLVR+N+IDS +L+KLY E++ D +ELDVQL N
Sbjct: 201  EKAINLISRMRQDGYPSDFVNYSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSN 260

Query: 768  DIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXG 947
            DI++GF K+G+ ++AM FLG++QA+GLSP+T+T++++IS LG+ GR              
Sbjct: 261  DIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDN 320

Query: 948  GLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESA 1127
            GL+P+TRAYN +LKGYV  G L+DAE+IV+EMER+GV PDE TYSLLIDAY NAGRWESA
Sbjct: 321  GLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESA 380

Query: 1128 RIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDT 1307
            RIVLKEMEANN+ PNS+VFSRIL SYRDRGEWQ+ FQVLKEM+  GV+PDR FYN+MIDT
Sbjct: 381  RIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDT 440

Query: 1308 FGKYNCLDHALATLERMRDEGIEPDTVTWNTLIDCHCK 1421
            FGK++CLDHA+ T ++M  EGI+PDTVTWNTLIDCHCK
Sbjct: 441  FGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCK 478



 Score =  117 bits (293), Expect = 7e-24
 Identities = 77/330 (23%), Positives = 157/330 (47%), Gaps = 8/330 (2%)
 Frame = +3

Query: 456  YSVLIHTLGRS--------EKLYEAFLLSQKQTLTPLTYNVLIGACARNDDLEKAVILMN 611
            YS++I +L RS        +KLY      + +    L+ ++++G  A+  D  KA+  + 
Sbjct: 222  YSLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGF-AKAGDPNKAMEFLG 280

Query: 612  KMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTK 791
             ++  G          +I +L  + +I     E +++EMK + ++   +  N ++ G+ K
Sbjct: 281  MVQASGLSPRTATLIAVISALGDSGRIIEA--EAIFEEMKDNGLKPKTRAYNGLLKGYVK 338

Query: 792  SGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRA 971
            +G +  A   +  ++ +G+SP   T   +I    N GR               + P +  
Sbjct: 339  AGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYV 398

Query: 972  YNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEME 1151
            ++ +L  Y + G  + +  ++ EM+ +GV PD H Y+++ID +G     + A     +M 
Sbjct: 399  FSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKML 458

Query: 1152 ANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLD 1331
            +  ++P++  ++ ++  +      +R  ++ +EM + G  P    +NIMI++FG+    D
Sbjct: 459  SEGIQPDTVTWNTLIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWD 518

Query: 1332 HALATLERMRDEGIEPDTVTWNTLIDCHCK 1421
                 +  MR  G+ P+ VT+ TLID + K
Sbjct: 519  DVKTLMGNMRSLGLLPNVVTYTTLIDIYGK 548



 Score = 96.3 bits (238), Expect = 2e-17
 Identities = 67/320 (20%), Positives = 142/320 (44%), Gaps = 5/320 (1%)
 Frame = +3

Query: 465  LIHTLGRSEKLYEAFLLSQKQT---LTPLT--YNVLIGACARNDDLEKAVILMNKMRGEG 629
            +I  LG S ++ EA  + ++     L P T  YN L+    +   L+ A  ++++M   G
Sbjct: 297  VISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSG 356

Query: 630  YQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTKSGNVDR 809
               D   YSL+I +     + +S  +  +  EM+ + I  +  + + I+  +   G   +
Sbjct: 357  VSPDECTYSLLIDAYSNAGRWESARI--VLKEMEANNIMPNSYVFSRILASYRDRGEWQK 414

Query: 810  AMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRAYNAVLK 989
            +   L  ++ +G+ P       +I   G                  G++P T  +N ++ 
Sbjct: 415  SFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLID 474

Query: 990  GYVNNGCLRDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVKP 1169
             +        AE +  EM   G  P   T++++I+++G   RW+  + ++  M +  + P
Sbjct: 475  CHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLP 534

Query: 1170 NSHVFSRILVSYRDRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLDHALATL 1349
            N   ++ ++  Y   G +    + L++M+  G+KP    YN +I+ + +    + A+   
Sbjct: 535  NVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAF 594

Query: 1350 ERMRDEGIEPDTVTWNTLID 1409
              MR + ++P  +  N+LI+
Sbjct: 595  RLMRADSLKPSLLALNSLIN 614



 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 70/291 (24%), Positives = 131/291 (45%), Gaps = 3/291 (1%)
 Frame = +3

Query: 543  TYNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYD 722
            TY++LI A +     E A I++ +M       +   +S I+ S       D G  +K + 
Sbjct: 363  TYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYR-----DRGEWQKSFQ 417

Query: 723  ---EMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELG 893
               EMK   +  D    N ++  F K   +D AM     + + G+ P T T  ++I    
Sbjct: 418  VLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHC 477

Query: 894  NLGRXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEH 1073
                              G  P    +N ++  +       D + ++  M   G+ P+  
Sbjct: 478  KAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVV 537

Query: 1074 TYSLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEM 1253
            TY+ LID YG +GR+  A   L++M++  +KP+S +++ ++ +Y  +G  ++     + M
Sbjct: 538  TYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLM 597

Query: 1254 QKCGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGIEPDTVTWNTLI 1406
            +   +KP     N +I+ FG+      A + L+ M++  ++PD VT+ TL+
Sbjct: 598  RADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLM 648



 Score = 84.3 bits (207), Expect = 7e-14
 Identities = 62/246 (25%), Positives = 108/246 (43%)
 Frame = +3

Query: 546  YNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDE 725
            YNV+I    +   L+ A+   +KM  EG Q D V ++ +I    +    +    E+L++E
Sbjct: 434  YNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERA--EELFEE 491

Query: 726  MKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGR 905
            M        V   N ++  F +    D     +G +++ GL P   T  ++I   G  GR
Sbjct: 492  MMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGR 551

Query: 906  XXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSL 1085
                          GL+P +  YNA++  Y   G    A      M  + + P     + 
Sbjct: 552  FSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNS 611

Query: 1086 LIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCG 1265
            LI+A+G   R   A  VLK M+ N++KP+   ++ ++ +     ++ ++  V +EM   G
Sbjct: 612  LINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILAG 671

Query: 1266 VKPDRQ 1283
              PDR+
Sbjct: 672  CTPDRK 677



 Score = 79.0 bits (193), Expect = 3e-12
 Identities = 69/317 (21%), Positives = 134/317 (42%), Gaps = 5/317 (1%)
 Frame = +3

Query: 447  ELLYSVLIHTL---GRSEKLYEAFLLSQKQTLTPLTY--NVLIGACARNDDLEKAVILMN 611
            E  YS+LI      GR E         +   + P +Y  + ++ +     + +K+  ++ 
Sbjct: 361  ECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLK 420

Query: 612  KMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTK 791
            +M+  G + D   Y+++I +  + + +D  +    +D+M  + I+ D    N ++    K
Sbjct: 421  EMKNSGVRPDRHFYNVMIDTFGKFSCLDHAM--DTFDKMLSEGIQPDTVTWNTLIDCHCK 478

Query: 792  SGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRA 971
            +   +RA      +   G SP  +T   +I+  G   R              GL P    
Sbjct: 479  AELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVT 538

Query: 972  YNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEME 1151
            Y  ++  Y  +G   DA   + +M+  G+ P    Y+ LI+AY   G  E A    + M 
Sbjct: 539  YTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMR 598

Query: 1152 ANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLD 1331
            A+++KP+    + ++ ++ +       F VLK M++  +KPD   Y  ++    + +  +
Sbjct: 599  ADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFN 658

Query: 1332 HALATLERMRDEGIEPD 1382
               +  E M   G  PD
Sbjct: 659  KVPSVYEEMILAGCTPD 675


>ref|XP_002306972.1| predicted protein [Populus trichocarpa] gi|222856421|gb|EEE93968.1|
            predicted protein [Populus trichocarpa]
          Length = 709

 Score =  560 bits (1443), Expect = e-157
 Identities = 291/470 (61%), Positives = 356/470 (75%), Gaps = 5/470 (1%)
 Frame = +3

Query: 27   SATTTRFLRHRNFSLQSLSIASYKHAPLCSLVTALSLSEDDVITQEDGVSHYSHRRYDFS 206
            SAT+T      NF+  SLS +   H    S       S+DDV+  +        RRYDF+
Sbjct: 39   SATSTT----TNFADSSLSYSKRLH--YASQNDIEGFSDDDVLPLQS-------RRYDFT 85

Query: 207  PLLEFLS---TYSLDED-DSDY-SNSPTSLDPTELQLAESYRSVPASLWHYLLKXXXXXX 371
            PLL++LS   T S D D DSD  S+SPTSLDPTE QLAESYR VP  LWH LLK      
Sbjct: 86   PLLDYLSKKITTSTDTDSDSDSASSSPTSLDPTEFQLAESYRVVPGPLWHSLLKSLCTSS 145

Query: 372  XXXXXXXXXYALVDWLHRHNLCFSYELLYSVLIHTLGRSEKLYEAFLLSQKQTLTPLTYN 551
                     YA+V WL +HNLCFSYELLYS+LIH LG+SEKLYEAFLLSQ+Q LTPLTYN
Sbjct: 146  SSIGLA---YAVVLWLQKHNLCFSYELLYSILIHALGQSEKLYEAFLLSQRQNLTPLTYN 202

Query: 552  VLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMK 731
             LI ACARN+DLEKA+ L+ +MR +GY SDFVNYSLII+SL+R N++DS +L+KLY E++
Sbjct: 203  ALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRKNRVDSAILQKLYREIE 262

Query: 732  LDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXX 911
             D +ELDVQL NDI++GF K+G++ +A+ FLGV+Q +GLS KT+T+V++I  LGN GR  
Sbjct: 263  CDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTATLVAVIWALGNCGRTV 322

Query: 912  XXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSLLI 1091
                        GL+PRTRAYNA+L+GYV  G L+DAE++V+EMER+GV P+E TYS LI
Sbjct: 323  EAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTYSFLI 382

Query: 1092 DAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCGVK 1271
            DAYGNAGRWESARIVLKEMEA+NV+PN++VFSRIL SYRD+GEWQ+ FQVL+EM+  GV+
Sbjct: 383  DAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREMENSGVR 442

Query: 1272 PDRQFYNIMIDTFGKYNCLDHALATLERMRDEGIEPDTVTWNTLIDCHCK 1421
            PDR FYN+MIDTFGK+NCLDHA+AT +RM  EGIEPDTVTWNTLIDCHC+
Sbjct: 443  PDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCR 492



 Score =  106 bits (265), Expect = 1e-20
 Identities = 79/365 (21%), Positives = 160/365 (43%), Gaps = 43/365 (11%)
 Frame = +3

Query: 456  YSVLIHTLGRS--------EKLYEAFLLSQKQTLTPLTYNVLIGACARNDDLEKAVILMN 611
            YS++I +L R         +KLY      + +    L+ ++++G  A+  DL KA+  + 
Sbjct: 236  YSLIIRSLMRKNRVDSAILQKLYREIECDKLELDVQLSNDIIVGF-AKAGDLSKALEFLG 294

Query: 612  KMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTK 791
             ++G G          +I +L    +      E +++EM+ + ++   +  N ++ G+ K
Sbjct: 295  VVQGSGLSVKTATLVAVIWALGNCGRTVEA--EAIFEEMRDNGLKPRTRAYNALLRGYVK 352

Query: 792  SGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRA 971
            +G +  A   +  ++ +G+SP   T   +I   GN GR               ++P    
Sbjct: 353  AGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYV 412

Query: 972  YNAVLKGYVNNGCLRDAEWIVNEMERNGVFPD-----------------EH--------- 1073
            ++ +L  Y + G  + +  ++ EME +GV PD                 +H         
Sbjct: 413  FSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRML 472

Query: 1074 ---------TYSLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQ 1226
                     T++ LID +  AG+ + A  + +EM      P +  F+ ++ S+ D+  W 
Sbjct: 473  SEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWD 532

Query: 1227 RLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGIEPDTVTWNTLI 1406
             +  +L  M+  G+ P+   Y  +ID +GK    + A+  L+ M+  G++P +  +N LI
Sbjct: 533  DVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALI 592

Query: 1407 DCHCK 1421
            + + +
Sbjct: 593  NAYAQ 597



 Score =  106 bits (264), Expect = 2e-20
 Identities = 75/291 (25%), Positives = 133/291 (45%), Gaps = 3/291 (1%)
 Frame = +3

Query: 543  TYNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYD 722
            TY+ LI A       E A I++ +M     Q +   +S I+ S       D G  +K + 
Sbjct: 377  TYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYR-----DKGEWQKSFQ 431

Query: 723  ---EMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELG 893
               EM+   +  D    N ++  F K   +D AM     + + G+ P T T  ++I    
Sbjct: 432  VLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHC 491

Query: 894  NLGRXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEH 1073
              G+             GG  P    +N ++  + +     D + ++  M   G+ P+  
Sbjct: 492  RAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSV 551

Query: 1074 TYSLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEM 1253
            TY+ LID YG +GR+  A   L +M+A  +KP+S +++ ++ +Y  RG  ++     + M
Sbjct: 552  TYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAM 611

Query: 1254 QKCGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGIEPDTVTWNTLI 1406
            +  G+KP     N +I+ FG+      A   L+ M++  ++PD VT+ TL+
Sbjct: 612  RVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLM 662



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 65/312 (20%), Positives = 138/312 (44%), Gaps = 2/312 (0%)
 Frame = +3

Query: 480  GRSEKLYEAFLLSQKQTLTPLT--YNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNY 653
            GR+ +    F   +   L P T  YN L+    +   L+ A  ++++M   G   +   Y
Sbjct: 319  GRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSEMERSGVSPNEQTY 378

Query: 654  SLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVI 833
            S +I +     + +S  +  +  EM+   ++ +  + + I+  +   G   ++   L  +
Sbjct: 379  SFLIDAYGNAGRWESARI--VLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLREM 436

Query: 834  QANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCL 1013
            + +G+ P       +I   G                  G+ P T  +N ++  +   G  
Sbjct: 437  ENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKH 496

Query: 1014 RDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRI 1193
              AE +  EM   G  P   T++++I+++G+  RW+  + +L  M +  + PNS  ++ +
Sbjct: 497  DRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTL 556

Query: 1194 LVSYRDRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGI 1373
            +  Y   G +    + L +M+  G+KP    YN +I+ + +    + A++    MR +G+
Sbjct: 557  IDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGL 616

Query: 1374 EPDTVTWNTLID 1409
            +P  +  N+LI+
Sbjct: 617  KPSLLALNSLIN 628



 Score = 89.7 bits (221), Expect = 2e-15
 Identities = 70/317 (22%), Positives = 135/317 (42%), Gaps = 5/317 (1%)
 Frame = +3

Query: 447  ELLYSVLIHTLGRSEKLYEAFLLSQKQTLTPLTYNV-----LIGACARNDDLEKAVILMN 611
            E  YS LI   G + +   A ++ ++   + +  N      ++ +     + +K+  ++ 
Sbjct: 375  EQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGEWQKSFQVLR 434

Query: 612  KMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTK 791
            +M   G + D V Y+++I +  + N +D  +    +D M  + IE D    N ++    +
Sbjct: 435  EMENSGVRPDRVFYNVMIDTFGKFNCLDHAMAT--FDRMLSEGIEPDTVTWNTLIDCHCR 492

Query: 792  SGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRA 971
            +G  DRA      +   G SP  +T   +I+  G+  R              GL P +  
Sbjct: 493  AGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVT 552

Query: 972  YNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEME 1151
            Y  ++  Y  +G   DA   +++M+  G+ P    Y+ LI+AY   G  E A    + M 
Sbjct: 553  YTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMR 612

Query: 1152 ANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLD 1331
             + +KP+    + ++ ++ +       F VL+ M++  +KPD   Y  ++    +    D
Sbjct: 613  VDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFD 672

Query: 1332 HALATLERMRDEGIEPD 1382
               +  E M   G  PD
Sbjct: 673  KVPSVYEEMILSGCTPD 689



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 62/246 (25%), Positives = 110/246 (44%)
 Frame = +3

Query: 546  YNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDE 725
            YNV+I    + + L+ A+   ++M  EG + D V ++ +I    R  K D    E+L++E
Sbjct: 448  YNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNTLIDCHCRAGKHDRA--EELFEE 505

Query: 726  MKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGR 905
            M            N ++  F      D   + L  +++ GL P + T  ++I   G  GR
Sbjct: 506  MMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGR 565

Query: 906  XXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSL 1085
                          GL+P +  YNA++  Y   G    A      M  +G+ P     + 
Sbjct: 566  FNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNS 625

Query: 1086 LIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCG 1265
            LI+A+G   R   A  VL+ M+ N++KP+   ++ ++ +     ++ ++  V +EM   G
Sbjct: 626  LINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSG 685

Query: 1266 VKPDRQ 1283
              PDR+
Sbjct: 686  CTPDRK 691


>ref|XP_002865541.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297311376|gb|EFH41800.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 711

 Score =  556 bits (1432), Expect = e-156
 Identities = 278/431 (64%), Positives = 331/431 (76%), Gaps = 6/431 (1%)
 Frame = +3

Query: 147  DVITQEDGVSHYSHRRYDFSPLLEFLSTYS-----LD-EDDSDYSNSPTSLDPTELQLAE 308
            D   ++D  S   HRRYDFSPLL+FLS +      LD E +S+   SP SL+P E +L E
Sbjct: 66   DTNEEDDEFSSEVHRRYDFSPLLKFLSRFGPVELVLDSESESESEASPESLNPVEFELVE 125

Query: 309  SYRSVPASLWHYLLKXXXXXXXXXXXXXXXYALVDWLHRHNLCFSYELLYSVLIHTLGRS 488
            SY +VPA  WH L+K               YA+V WL +HNLCFSYELLYS+LIH LGRS
Sbjct: 126  SYSAVPAPYWHSLIKSLCSSTSSLGLA---YAVVSWLQKHNLCFSYELLYSILIHALGRS 182

Query: 489  EKLYEAFLLSQKQTLTPLTYNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQ 668
            EKLYEAFLLSQKQTLTPLTYN LIGACARN+D+EKA+ L+++MR +GYQSDFVNYSL+IQ
Sbjct: 183  EKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLISRMRQDGYQSDFVNYSLVIQ 242

Query: 669  SLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGL 848
            SL R NKIDS +L++LY E++ D +ELDVQL+NDI++GF KSG+  RA+  LG+ QA GL
Sbjct: 243  SLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGMAQATGL 302

Query: 849  SPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEW 1028
            S KT+T+VSIIS L N GR              G++PRT+AYNA+LKGYV  G L+DAE 
Sbjct: 303  SAKTATLVSIISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAEL 362

Query: 1029 IVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYR 1208
            +V+EME+ GV PDEHTYSLLIDAY NAGRWESARIVLKEME  +V+PNS VFSR+L  YR
Sbjct: 363  MVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYR 422

Query: 1209 DRGEWQRLFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGIEPDTV 1388
            DRGEWQ+ FQVLKEM+  GVKPDRQFYN++IDTFGK+NCLDHA+ T +RM  EGIEPD V
Sbjct: 423  DRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRV 482

Query: 1389 TWNTLIDCHCK 1421
            TWNTLIDCHCK
Sbjct: 483  TWNTLIDCHCK 493



 Score =  111 bits (277), Expect = 5e-22
 Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 38/352 (10%)
 Frame = +3

Query: 465  LIHTLGRSEKLYEAFLLSQK---QTLTPLT--YNVLIGACARNDDLEKAVILMNKMRGEG 629
            +I  L  S +  EA  L ++     + P T  YN L+    +   L+ A +++++M   G
Sbjct: 312  IISALANSGRTLEAEALFEELRQSGIKPRTKAYNALLKGYVKTGPLKDAELMVSEMEKRG 371

Query: 630  YQSDFVNYSLIIQSLVR---------------------NNKIDSGLLEKLYD-------- 722
               D   YSL+I + V                      N+ + S LL    D        
Sbjct: 372  VSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVFSRLLAGYRDRGEWQKTF 431

Query: 723  ----EMKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISEL 890
                EMK   ++ D Q  N ++  F K   +D AM     + + G+ P   T  ++I   
Sbjct: 432  QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 491

Query: 891  GNLGRXXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDE 1070
               GR              G  P    YN ++  Y +     D + ++ +M+  G+ P+ 
Sbjct: 492  CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 551

Query: 1071 HTYSLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKE 1250
             T++ L+D YG +GR+  A   L+EM++  +KP+S +++ ++ +Y  RG  ++     + 
Sbjct: 552  VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 611

Query: 1251 MQKCGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGIEPDTVTWNTLI 1406
            M   G+KP     N +I+ FG+      A A L+ M++ G++PD VT+ TL+
Sbjct: 612  MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 663



 Score =  100 bits (250), Expect = 7e-19
 Identities = 79/364 (21%), Positives = 151/364 (41%), Gaps = 42/364 (11%)
 Frame = +3

Query: 456  YSVLIHTLGRSEKLYEAFLLS-------QKQTLTPLTYNVLIGACARNDDLEKAVILMNK 614
            YS++I +L R  K+    L          K  L     N +I   A++ D  +A+ L+  
Sbjct: 237  YSLVIQSLTRCNKIDSVMLQRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSRALQLLGM 296

Query: 615  MRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTKS 794
             +  G  +       II +L  + +      E L++E++   I+   +  N ++ G+ K+
Sbjct: 297  AQATGLSAKTATLVSIISALANSGRTLEA--EALFEELRQSGIKPRTKAYNALLKGYVKT 354

Query: 795  GNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRAY 974
            G +  A   +  ++  G+SP   T   +I    N GR             G ++P +  +
Sbjct: 355  GPLKDAELMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMETGDVQPNSFVF 414

Query: 975  NAVLKGYVNNG-----------------------------------CLRDAEWIVNEMER 1049
            + +L GY + G                                   CL  A    + M  
Sbjct: 415  SRLLAGYRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLS 474

Query: 1050 NGVFPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQR 1229
             G+ PD  T++ LID +   GR   A  + + ME     P +  ++ ++ SY D+  W  
Sbjct: 475  EGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDD 534

Query: 1230 LFQVLKEMQKCGVKPDRQFYNIMIDTFGKYNCLDHALATLERMRDEGIEPDTVTWNTLID 1409
            + ++L +M+  G+ P+   +  ++D +GK    + A+  LE M+  G++P +  +N LI+
Sbjct: 535  MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALIN 594

Query: 1410 CHCK 1421
             + +
Sbjct: 595  AYAQ 598



 Score = 81.6 bits (200), Expect = 4e-13
 Identities = 58/246 (23%), Positives = 111/246 (45%)
 Frame = +3

Query: 546  YNVLIGACARNDDLEKAVILMNKMRGEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDE 725
            YNV+I    + + L+ A+   ++M  EG + D V ++ +I    ++ +    + E++++ 
Sbjct: 449  YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR--HIVAEEMFEA 506

Query: 726  MKLDAIELDVQLLNDIVLGFTKSGNVDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGR 905
            M+           N ++  +      D     LG +++ G+ P   T  +++   G  GR
Sbjct: 507  MERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 566

Query: 906  XXXXXXXXXXXXXGGLRPRTRAYNAVLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSL 1085
                          GL+P +  YNA++  Y   G    A      M  +G+ P     + 
Sbjct: 567  FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 626

Query: 1086 LIDAYGNAGRWESARIVLKEMEANNVKPNSHVFSRILVSYRDRGEWQRLFQVLKEMQKCG 1265
            LI+A+G   R   A  VL+ M+ N VKP+   ++ ++ +     ++Q++  V +EM   G
Sbjct: 627  LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSG 686

Query: 1266 VKPDRQ 1283
             KPDR+
Sbjct: 687  CKPDRK 692



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 5/256 (1%)
 Frame = +3

Query: 456  YSVLIHTLGRSEKLYEAF-----LLSQKQTLTPLTYNVLIGACARNDDLEKAVILMNKMR 620
            Y+V+I T G+   L  A      +LS+      +T+N LI    ++     A  +   M 
Sbjct: 449  YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAME 508

Query: 621  GEGYQSDFVNYSLIIQSLVRNNKIDSGLLEKLYDEMKLDAIELDVQLLNDIVLGFTKSGN 800
              G       Y+++I S     + D   +++L  +MK   I  +V     +V  + KSG 
Sbjct: 509  RRGCLPCATTYNIMINSYGDQERWDD--MKRLLGKMKSQGILPNVVTHTTLVDVYGKSGR 566

Query: 801  VDRAMHFLGVIQANGLSPKTSTVVSIISELGNLGRXXXXXXXXXXXXXGGLRPRTRAYNA 980
             + A+  L  +++ GL P ++   ++I+     G               GL+P   A N+
Sbjct: 567  FNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNS 626

Query: 981  VLKGYVNNGCLRDAEWIVNEMERNGVFPDEHTYSLLIDAYGNAGRWESARIVLKEMEANN 1160
            ++  +  +    +A  ++  M+ NGV PD  TY+ L+ A     +++    V +EM  + 
Sbjct: 627  LINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPGVYEEMIMSG 686

Query: 1161 VKPNSHVFSRILVSYR 1208
             KP+    S +  + R
Sbjct: 687  CKPDRKARSMLRSALR 702