BLASTX nr result

ID: Atractylodes21_contig00031379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031379
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209...    62   6e-08
gb|ACZ36947.1| reverse transcriptase, partial [Prunus mume]            61   8e-08
gb|ACU42184.1| reverse transcriptase [Prunus mume]                     61   8e-08
gb|ACU42177.1| reverse transcriptase [Prunus mume]                     61   8e-08
dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]         58   1e-07

>ref|XP_004145488.1| PREDICTED: uncharacterized protein LOC101209704 [Cucumis sativus]
          Length = 1503

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +2

Query: 14   HTHEGHYEFLVMPFGLVNAPATFQGLMND 100
            HTHEGHYEFLVMPFGL NAPATFQ LMN+
Sbjct: 952  HTHEGHYEFLVMPFGLTNAPATFQSLMNE 980


>gb|ACZ36947.1| reverse transcriptase, partial [Prunus mume]
          Length = 143

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +2

Query: 14  HTHEGHYEFLVMPFGLVNAPATFQGLMND 100
           HTHEGHYEFLVMPFGL NAP+TFQ LMND
Sbjct: 61  HTHEGHYEFLVMPFGLSNAPSTFQSLMND 89


>gb|ACU42184.1| reverse transcriptase [Prunus mume]
          Length = 143

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +2

Query: 14  HTHEGHYEFLVMPFGLVNAPATFQGLMND 100
           HTHEGHYEFLVMPFGL NAP+TFQ LMND
Sbjct: 61  HTHEGHYEFLVMPFGLSNAPSTFQSLMND 89


>gb|ACU42177.1| reverse transcriptase [Prunus mume]
          Length = 143

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/29 (89%), Positives = 27/29 (93%)
 Frame = +2

Query: 14  HTHEGHYEFLVMPFGLVNAPATFQGLMND 100
           HTHEGHYEFLVMPFGL NAP+TFQ LMND
Sbjct: 61  HTHEGHYEFLVMPFGLSNAPSTFQSLMND 89


>dbj|BAB02140.1| unnamed protein product [Arabidopsis thaliana]
          Length = 904

 Score = 57.8 bits (138), Expect(2) = 1e-07
 Identities = 25/32 (78%), Positives = 27/32 (84%)
 Frame = +2

Query: 2   QPFGHTHEGHYEFLVMPFGLVNAPATFQGLMN 97
           +P   TH GHYE+LVMPFGL NAPATFQGLMN
Sbjct: 552 KPTFKTHSGHYEYLVMPFGLTNAPATFQGLMN 583



 Score = 22.7 bits (47), Expect(2) = 1e-07
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 157 SQSMEAHLQHFQSI 198
           S SME H+QH Q +
Sbjct: 605 SSSMEEHVQHLQQV 618


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