BLASTX nr result

ID: Atractylodes21_contig00031272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00031272
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003208050.1| putative polyprotein [Pelargonium vein bandi...   192   3e-47
ref|NP_758808.1| polyprotein [Taro bacilliform virus] gi|2581483...   174   7e-42
ref|YP_001293182.1| hypothetical protein LBBV_gp3 [Lucky bamboo ...   173   2e-41
ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle v...   172   4e-41
ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|...   139   5e-33

>ref|YP_003208050.1| putative polyprotein [Pelargonium vein banding virus]
            gi|258547408|gb|ACV74337.1| putative polyprotein
            [Pelargonium vein banding virus]
          Length = 1970

 Score =  192 bits (488), Expect = 3e-47
 Identities = 87/136 (63%), Positives = 114/136 (83%)
 Frame = -2

Query: 435  GALLVLPPDPGLWADIIARWESITINKLNEQIWRDNKDKLAYVENLLGENEKRMWQQWRT 256
            GA+LVLP D GL+ ++I+RWESITIN LN++ W +NK ++ YVENLLGE+EK++WQQWRT
Sbjct: 681  GAMLVLPEDIGLYEEVISRWESITINLLNDRTWDNNKARVIYVENLLGESEKKIWQQWRT 740

Query: 255  AYPEAHENLVTIADDPQNITSQLRQIILLEDPYRGSTEEQDIAYRDLERLTCENTKDLWK 76
             Y + +E LV IADDPQ+ITSQ+R +I LEDPYRGSTEEQ  AY DLERL C++ KD+  
Sbjct: 741  TYTKEYEELVAIADDPQDITSQVRMVITLEDPYRGSTEEQSRAYLDLERLVCDDIKDILP 800

Query: 75   FLNEFRILASKSGRLF 28
            +LN+F++LA+KSGR+F
Sbjct: 801  YLNDFKVLAAKSGRMF 816


>ref|NP_758808.1| polyprotein [Taro bacilliform virus]
           gi|25814833|gb|AAN75640.1|AF357836_3 polyprotein [taro
           bacilliform virus]
          Length = 1881

 Score =  174 bits (442), Expect = 7e-42
 Identities = 86/172 (50%), Positives = 119/172 (69%), Gaps = 1/172 (0%)
 Frame = -2

Query: 540 PHTHTKLSKNSGKFQR-RIRGIL*SAVDTTPSNDKYGALLVLPPDPGLWADIIARWESIT 364
           P    + S  S +F+  R +      +   P+ ++ GA+LVLP D GL+ D I+RWESIT
Sbjct: 439 PRPQAETSSTSERFKNFRAKPYSTPTIFLPPAYNQQGAILVLPDDIGLYEDTISRWESIT 498

Query: 363 INKLNEQIWRDNKDKLAYVENLLGENEKRMWQQWRTAYPEAHENLVTIADDPQNITSQLR 184
           +N +NE++W  N+ K  Y+ENLLGE EK+ W QWRT Y   ++ LV  +D+ QN+ SQ+R
Sbjct: 499 LNMMNEKVWPSNEAKAKYMENLLGEMEKKTWIQWRTTYVSEYDALVQQSDETQNLLSQVR 558

Query: 183 QIILLEDPYRGSTEEQDIAYRDLERLTCENTKDLWKFLNEFRILASKSGRLF 28
           +I LL+DPY+GST EQD AY DLER++C+N KDL  +L +FR LA+KSGRLF
Sbjct: 559 RIFLLQDPYQGSTAEQDQAYNDLERISCDNIKDLIPYLIQFRNLAAKSGRLF 610


>ref|YP_001293182.1| hypothetical protein LBBV_gp3 [Lucky bamboo bacilliform virus]
            gi|148645292|gb|ABR01170.1| hypothetical protein [Lucky
            bamboo bacilliform virus]
          Length = 1913

 Score =  173 bits (438), Expect = 2e-41
 Identities = 82/146 (56%), Positives = 114/146 (78%), Gaps = 1/146 (0%)
 Frame = -2

Query: 435  GALLVLPPDPGLWADIIARWESITINKLNEQIWRDNKDKLAYVENLLGENEKRMWQQWRT 256
            GALLVLP D GL+ D+I+RWE+IT+N L ++++ DN+ KL YVENLLGE+EK++W QWR 
Sbjct: 596  GALLVLPEDIGLYQDVISRWETITLNVLADKVFSDNRSKLMYVENLLGEDEKKVWIQWRM 655

Query: 255  AYPEAHENLVTIADDPQNITSQLRQIILLEDPYRGSTEEQDIAYRDLERLTCENTKDLWK 76
            A+ + +E+L+ +ADD Q I SQ+R+II LEDP +GSTEEQD AY DL RL+C N KDL  
Sbjct: 656  AFEQEYESLIAVADDSQAIISQVRRIITLEDPSQGSTEEQDRAYMDLGRLSCTNMKDLLD 715

Query: 75   FLNEFRILASKSGRLFF-ASTTKKFF 1
            ++N+++ LA+KSGR++     + KFF
Sbjct: 716  YMNDYKTLAAKSGRMYVNHELSDKFF 741


>ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle virus]
            gi|92430216|gb|ABE77344.1| hypothetical protein [Dracaena
            mottle virus]
          Length = 1916

 Score =  172 bits (436), Expect = 4e-41
 Identities = 82/146 (56%), Positives = 113/146 (77%), Gaps = 1/146 (0%)
 Frame = -2

Query: 435  GALLVLPPDPGLWADIIARWESITINKLNEQIWRDNKDKLAYVENLLGENEKRMWQQWRT 256
            GALLVLP D GL+ D+I+RWE+IT+N L ++++ DN+ KL YVENLLGE+EK+ W QWR 
Sbjct: 598  GALLVLPEDIGLYQDVISRWETITLNVLADKVFSDNRSKLMYVENLLGEDEKKAWIQWRM 657

Query: 255  AYPEAHENLVTIADDPQNITSQLRQIILLEDPYRGSTEEQDIAYRDLERLTCENTKDLWK 76
            A+ + +E+L+ +ADD Q I SQ+R+II LEDP +GSTEEQD AY DL RL+C N KDL  
Sbjct: 658  AFEQEYESLIAVADDSQAIISQVRRIITLEDPSQGSTEEQDRAYMDLGRLSCTNMKDLLD 717

Query: 75   FLNEFRILASKSGRLFF-ASTTKKFF 1
            ++N+++ LA+KSGR++     + KFF
Sbjct: 718  YMNDYKTLAAKSGRMYVNHELSDKFF 743


>ref|YP_006273075.1| polyprotein [Fig badnavirus 1] gi|333493962|gb|AEF56561.1|
           polyprotein [Fig badnavirus 1]
          Length = 1837

 Score =  139 bits (350), Expect(2) = 5e-33
 Identities = 74/148 (50%), Positives = 98/148 (66%), Gaps = 4/148 (2%)
 Frame = -2

Query: 459 TTPS-NDKYGALLVLPPDPGLWADIIARWESITINKLNEQIWRDNKDKLAYVENLLGENE 283
           T PS   K GA+ V+P   GL+ D  +RWES+T N +  Q + D +DK+ Y+ENLLGE E
Sbjct: 553 TLPSAQQKNGAMFVIPEQLGLFNDAFSRWESVTKNHVATQGFTDTRDKIKYMENLLGEIE 612

Query: 282 KRMWQQWRTAYPEAHENLVTIA---DDPQNITSQLRQIILLEDPYRGSTEEQDIAYRDLE 112
           K +W QWR  Y   +E LV I    D  QNI SQ+R++  LEDP +GST  QD AYR+LE
Sbjct: 613 KLIWIQWRMTYATEYEALVAIGEGRDGTQNILSQMRRVFSLEDPAQGSTVIQDEAYRELE 672

Query: 111 RLTCENTKDLWKFLNEFRILASKSGRLF 28
           R++C + K +  FLNE+  LA+K+GRLF
Sbjct: 673 RMSCTDVKYIIPFLNEYMRLAAKTGRLF 700



 Score = 27.3 bits (59), Expect(2) = 5e-33
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
 Frame = -3

Query: 578 GPSVYPPARE-----NSIPIHTQNYPRTQGSFKGGYGEYYNQQWTLPPA 447
           G   YPPAR       S       +   +  FKGGY +   + WTLP A
Sbjct: 512 GRPSYPPARTIPGGGASSSAEPPRFDAARTRFKGGYND---EMWTLPSA 557


Top